LOCUS BC019111 2038 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens sequestosome 1, mRNA (cDNA clone MGC:29719 IMAGE:5091391), complete cds. ACCESSION BC019111 VERSION BC019111.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2038) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2038) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 39 Row: p Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..2038 /db_xref="H-InvDB:HIT000038560" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:29719 IMAGE:5091391" /tissue_type="Pancreas, epithelioid carcinoma" /clone_lib="NIH_MGC_42" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2038 /gene="SQSTM1" /gene_synonym="p60" /gene_synonym="p62" /gene_synonym="ZIP3" /db_xref="GeneID:8878" /db_xref="HGNC:HGNC:11280" /db_xref="MIM:601530" CDS 33..1355 /gene="SQSTM1" /gene_synonym="p60" /gene_synonym="p62" /gene_synonym="ZIP3" /codon_start=1 /product="sequestosome 1" /protein_id="AAH19111.1" /db_xref="GeneID:8878" /db_xref="HGNC:HGNC:11280" /db_xref="MIM:601530" /translation="MASLTVKAYLLGKEDAAREIRRFSFCCSPEPEAEAEAAAGPGPC ERLLSRVAALFPALRPGGFQAHYRDEDGDLVAFSSDEELTMAMSYVKDDIFRIYIKEK KECRRDHRPPCAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLH RGHTKLAFPSPFGHLSEGFSHSRWLRKVKHGHFGWPGWEMGPPGNWSPRPPRAGEARP GPTAESASGPSEDPSVNFLKNVGESVAAALSPLGIEVDIDVEHGGKRSRLTPVSPESS STEEKSSSQPSSCCSDPSKPGGNVEGATQSLAEQMRKIALESEGRPEEQMESDNCSGG DDDWTHLSSKEVDPSTGELQSLQMPESEGPSSLDPSQEGPTGLKEAALYPHLPPEADP RLIESLSQMLSMGFSDEGGWLTRLLQTKNYDIGAALDTIQYSKHPPPL" BASE COUNT 441 a 572 c 590 g 435 t ORIGIN 1 aattcggcac gagggccagc tcgccgctcg ctatggcgtc gctcaccgtg aaggcctacc 61 ttctgggcaa ggaggacgcg gcgcgcgaga ttcgccgctt cagcttctgc tgcagccccg 121 agcctgaggc ggaagccgag gctgcggcgg gtccgggacc ctgcgagcgg ctgctgagcc 181 gggtggccgc cctgttcccc gcgctgcggc ctggcggctt ccaggcgcac taccgcgatg 241 aggacgggga cttggttgcc ttttccagtg acgaggaatt gacaatggcc atgtcctacg 301 tgaaggatga catcttccga atctacatta aagagaaaaa agagtgccgg cgggaccacc 361 gcccaccgtg tgctcaggag gcgccccgca acatggtgca ccccaatgtg atctgcgatg 421 gctgcaatgg gcctgtggta ggaacccgct acaagtgcag cgtctgccca gactacgact 481 tgtgtagcgt ctgcgaggga aagggcttgc accgggggca caccaagctc gcattcccca 541 gccccttcgg gcacctgtct gagggcttct cgcacagccg ctggctccgg aaggtgaaac 601 acggacactt cgggtggcca ggatgggaaa tgggtccacc aggaaactgg agcccacgtc 661 ctcctcgtgc aggggaggcc cgccctggcc ccacggcaga atcagcttct ggtccatcgg 721 aggatccgag tgtgaatttc ctgaagaacg ttggggagag tgtggcagct gcccttagcc 781 ctctgggcat tgaagttgat atcgatgtgg agcacggagg gaaaagaagc cgcctgaccc 841 ccgtctctcc agagagttcc agcacagagg agaagagcag ctcacagcca agcagctgct 901 gctctgatcc cagcaagccg ggtgggaatg ttgagggcgc cacgcagtct ctggcggagc 961 agatgagaaa gatcgccttg gagtccgagg ggcgccctga ggaacagatg gagtcggata 1021 actgttcagg aggagatgat gactggaccc atctgtcttc aaaagaagtg gacccgtcta 1081 caggtgaact ccagtcccta cagatgccag aatccgaagg gccaagctct ctggacccct 1141 cccaggaggg acccacaggg ctgaaggaag ctgccttgta cccacatctc ccgccagagg 1201 ctgacccgcg gctgattgag tccctctccc agatgctgtc catgggcttc tctgatgaag 1261 gcggctggct caccaggctc ctgcagacca agaactatga catcggagcg gctctggaca 1321 ccatccagta ttcaaagcat cccccgccgt tgtgaccact tttgcccacc tcttctgcgt 1381 gcccctcttc tgtctcatag ttgtgttaag cttgcgtaga attgcaggtc tctgtacggg 1441 ccagtttctc tgccttcttc caggatcagg ggttagggtg caagaagcca tttagggcag 1501 caaaacaagt gacatgaagg gagggtccct gtgtgtgtgt gtgctgatgt ttcctgggtg 1561 ccctggctcc ttgcagcagg gctgggcctg cgagacccaa ggctcactgc agcgcgctcc 1621 tgaccccttc ctgcaggggc tacgttagca gcccagcaca tagcttgcct aatggctttc 1681 actttctctt ttgttttaaa tgactcatag gtccctgaca tttagttgat tattttctgc 1741 tacagacctg gtacactctg attttagata aagtaagcct aggtgttgtc agcaggcagg 1801 ctggggaggc cagtgttgtg ggcttcctgc tgggactgag aaggctcacg aagggcatcc 1861 gcaatgttgg tttcactgag agctgcctcc tggtctcttc accactgtag ttctctcatt 1921 tccaaaccat cagctgcttt taaaataaga tctctttgta gccatcctgt taaatttgta 1981 aacaatctaa ttaaatggca tcagcacttt aaccaaaaaa aaaaaaaaaa aaaaaaaa //