LOCUS BC019066 1705 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens solute carrier family 10 (sodium/bile acid
cotransporter family), member 4, mRNA (cDNA clone MGC:29802
IMAGE:4897519), complete cds.
ACCESSION BC019066
VERSION BC019066.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1705)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1705)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC019066.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: j Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34328082.
FEATURES Location/Qualifiers
source 1..1705
/db_xref="H-InvDB:HIT000038529"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29802 IMAGE:4897519"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1705
/gene="SLC10A4"
/gene_synonym="MGC29802"
/db_xref="GeneID:201780"
/db_xref="HGNC:HGNC:22980"
CDS 131..1444
/gene="SLC10A4"
/gene_synonym="MGC29802"
/codon_start=1
/product="solute carrier family 10 (sodium/bile acid
cotransporter family), member 4"
/protein_id="AAH19066.1"
/db_xref="GeneID:201780"
/db_xref="HGNC:HGNC:22980"
/translation="MDGNDNVTLLFAPLLRDNYTLAPNASSLGPGTDLALAPASSAGP
GPGLSLGPGPSFGFSPGPTPTPEPTTSGLAGGAASHGPSPFPRPWAPHALPFWDTPLN
HGLNVFVGAALCITMLGLGCTVDVNHFGAHVRRPVGALLAALCQFGLLPLLAFLLALA
FKLDEVAAVAVLLCGCCPGGNLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWI
YSWAWINTPIVQLLPLGTVTLTLCSTLIPIGLGVFIRYKYSRVADYIVKVSLWSLLVT
LVVLFIMTGTMLGPELLASIPAAVYVIAIFMPLAGYASGYGLATLFHLPPNCKRTVCL
ETGSQNVQLCTAILKLAFPPQFIGSMYMFPLLYALFQSAEAGIFVLIYKMYGSEMLHK
RDPLDEDEDTDISYKKLKEEEMADTSYGTVKAENIIMMETAQTSL"
BASE COUNT 390 a 494 c 439 g 382 t
ORIGIN
1 agcacgtcag cggcgcgcag ccggggctcg gagaccgacg ggcagaacga cgggcggcga
61 ctgcggcgac cgcgggacgg cgagaggcac gcggcgggag gggaccggaa tccgcagctc
121 cggccgcgcc atggacggca acgacaacgt gaccctgctc ttcgcccctc tgctgcggga
181 caactacacc ctggcgccca atgccagcag cctgggcccc ggcacggacc tcgccctcgc
241 ccctgcctcc agcgccggcc ccggccctgg gctcagcctc gggccgggtc cgagcttcgg
301 cttcagcccc ggccccactc cgaccccgga gcccacgacc agcggcctcg cgggcggcgc
361 ggcgagccac ggcccttccc cgttccctcg gccctgggcg ccccacgcgc tcccgttctg
421 ggacacgccg ctgaaccacg ggctgaacgt gttcgtgggc gccgccctgt gcatcaccat
481 gctgggcctg ggctgcacgg tggacgtgaa ccacttcggg gcgcacgtcc gtcggcccgt
541 gggcgcgctg ctggcagcgc tctgccagtt cggcctcctg ccgctgctgg ccttcctgct
601 ggccctcgcc ttcaagctgg acgaggtggc cgccgtggcg gtgctcctgt gtggctgctg
661 tcccggcggc aatctctcca atcttatgtc cctgctggtt gacggcgaca tgaacctcag
721 catcatcatg accatctcct ccacgcttct ggccctcgtc ttgatgcccc tgtgcctgtg
781 gatctacagc tgggcttgga tcaacacccc tatcgtgcag ttactacccc tagggaccgt
841 gaccctgact ctctgcagca ctctcatacc tatcgggttg ggcgtcttca ttcgctacaa
901 atacagccgg gtggctgact acattgtgaa ggtttccctg tggtctctgc tagtgactct
961 ggtggtcctt ttcataatga ccggcactat gttaggacct gaactgctgg caagtatccc
1021 tgcagctgtt tatgtgatag caatttttat gcctttggca ggctacgctt caggttatgg
1081 tttagctact ctcttccatc ttccacccaa ctgcaagagg actgtatgtc tggaaacagg
1141 tagtcagaat gtgcagctct gtacagccat tctaaaactg gcctttccac cgcaattcat
1201 aggaagcatg tacatgtttc ctttgctgta tgcacttttc cagtctgcag aagcggggat
1261 ttttgtttta atctataaaa tgtatggaag tgaaatgttg cacaagcgag atcctctaga
1321 tgaagatgaa gatacagata tttcttataa aaaactaaaa gaagaggaaa tggcagacac
1381 ttcctatggc acagtgaaag cagaaaatat aataatgatg gaaaccgctc agacttctct
1441 ctaaatgtgg agatacacag gagcttctat cttgctgaaa tattgcttca tatttatagc
1501 ctgtggtagt gcacatggtt aacataaaag ataacactgg ttcacatcat acatgtaaca
1561 attctgatct ttttaaggtt cactggtgta ttaaccaaac gttgtcacaa attacaaatc
1621 aatgctgtaa tataatttgc acctggaatg gcaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa aaaaa
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