LOCUS BC018999 1759 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens sphingomyelin phosphodiesterase, acid-like 3A, mRNA (cDNA clone MGC:20681 IMAGE:3138813), complete cds. ACCESSION BC018999 VERSION BC018999.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1759) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1759) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC018999.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 30 Row: a Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34147321. FEATURES Location/Qualifiers source 1..1759 /db_xref="H-InvDB:HIT000038503" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:20681 IMAGE:3138813" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1759 /gene="SMPDL3A" /gene_synonym="ASM3A" /gene_synonym="ASML3a" /gene_synonym="FLJ20177" /gene_synonym="yR36GH4.1" /db_xref="GeneID:10924" /db_xref="HGNC:HGNC:17389" CDS 69..1430 /gene="SMPDL3A" /gene_synonym="ASM3A" /gene_synonym="ASML3a" /gene_synonym="FLJ20177" /gene_synonym="yR36GH4.1" /codon_start=1 /product="sphingomyelin phosphodiesterase, acid-like 3A" /protein_id="AAH18999.1" /db_xref="GeneID:10924" /db_xref="HGNC:HGNC:17389" /translation="MALVRALVCCLLTAWHCRSGLGLPVAPAGGRNPPPAIGQFWHVT DLHLDPTYHITDDHTKVCASSKGANASNPGPFGDVLCDSPYQLILSAFDFIKNSGQEA SFMIWTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPALGNHDYWPQDQL PVVTSKVYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPNLRIISLNTNLYYGPNI MTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITAMREYYNEKLI DIFQKYSDVIAGQFYGHTHRDSIMVLSDKKGSPVNSLFVAPAVTPVKSVLEKQTNNPG IRLFQYDPRDYKLLDMLQYYLNLTEANLKGESIWKLEYILTQTYDIEDLQPESLYGLA KQFTILDSKQFIKYYNYFFVSYDSSVTCDKTCKAFQICAIMNLDNISYADCLKQLYIK HNY" BASE COUNT 538 a 356 c 341 g 524 t ORIGIN 1 ctcaggcctg acggtccgag tggagctgcg ggacagcccg aacctccagg tcagccccgc 61 ggccctccat ggcgctggtg cgcgcactcg tctgctgcct gctgactgcc tggcactgcc 121 gctccggcct cgggctgccc gtggcgcccg caggcggcag gaatcctcct ccggcgatag 181 gacagttttg gcatgtgact gacttacact tagaccctac ttaccacatc acagatgacc 241 acacaaaagt gtgtgcttca tctaaaggtg caaatgcctc caaccctggc ccttttggag 301 atgttctgtg tgattctcca tatcaactta ttttgtcagc atttgatttt attaaaaatt 361 ctggacaaga agcatctttc atgatatgga caggggatag cccacctcat gttcctgtac 421 ctgaactctc aacagacact gttataaatg tgatcactaa tatgacaacc accatccaga 481 gtctctttcc aaatctccag gttttccctg cgctgggtaa tcatgactat tggccacagg 541 atcaactgcc tgtagtcacc agtaaagtgt acaatgcagt agcaaacctc tggaaaccat 601 ggctagatga agaagctatt agtactttaa ggaaaggtgg tttttattca cagaaagtta 661 caactaatcc aaaccttagg atcatcagtc taaacacaaa cttgtactac ggcccaaata 721 taatgacact gaacaagact gacccagcca accagtttga atggctagaa agtacattga 781 acaactctca gcagaataag gagaaggtgt atatcatagc acatgttcca gtggggtatc 841 tgccatcttc acagaacatc acagcaatga gagaatacta taatgagaaa ttgatagata 901 tttttcaaaa atacagtgat gtcattgcag gacaatttta tggacacact cacagagaca 961 gcattatggt tctttcagat aaaaaaggaa gtccagtaaa ttctttgttt gtggctcctg 1021 ctgttacacc agtgaagagt gttttagaaa aacagaccaa caatcctggt atcagactgt 1081 ttcagtatga tcctcgtgat tataaattat tggatatgtt gcagtattac ttgaatctga 1141 cagaggcgaa tctaaaggga gagtccatct ggaagctgga gtatatcctg acccagacct 1201 acgacattga agatttgcag ccggaaagtt tatatggatt agctaaacaa tttacaatcc 1261 tagacagtaa gcagtttata aaatactaca attacttctt tgtgagttat gacagcagtg 1321 taacatgtga taagacatgt aaggcctttc agatttgtgc aattatgaat cttgataata 1381 tttcctatgc agattgcctc aaacagcttt atataaagca caattactag tatttcacag 1441 tttttgctaa tagaaaatgc tgattctgat tctgagatca atttgtggga attttacata 1501 aatctttgtt aattactgag tgggcaagta gacttcctgt ctttgctttc tttttttttt 1561 ctttttgatg ccttaatgta gatatcttta tcattctgaa ttgtattata tatttaaagt 1621 gctcattaat agaatgatgg atgtaaattg gatgtaaata ttcagtttat ataattatat 1681 ctaatttgta cccttgttga aattgtcatt tatacaataa agcgaattct ttatctctaa 1741 aaaaaaaaaa aaaaaaaaa //