LOCUS BC018918 2581 bp mRNA linear HUM 19-JUN-2008 DEFINITION Homo sapiens tetratricopeptide repeat domain 38, mRNA (cDNA clone MGC:12603 IMAGE:4130906), complete cds. ACCESSION BC018918 VERSION BC018918.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2581) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2581) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 9, 2003 this sequence version replaced BC018918.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 17 Row: i Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 8923627. FEATURES Location/Qualifiers source 1..2581 /db_xref="H-InvDB:HIT000038471" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:12603 IMAGE:4130906" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2581 /gene="TTC38" /db_xref="GeneID:55020" /db_xref="HGNC:HGNC:26082" CDS 18..1427 /gene="TTC38" /codon_start=1 /product="tetratricopeptide repeat domain 38" /protein_id="AAH18918.2" /db_xref="GeneID:55020" /db_xref="HGNC:HGNC:26082" /translation="MAAASPLRDCQAWKDARLPLSTTSNEACKLFDATLTQYVKWTND KSLGGIEGCLSKLKAADPTFVMGHAMATGLVLIGTGSSVKLDKELDLAVKTMVEISRT QPLTRREQLHVSAVETFANGNFPKACELWEQILQDHPTDMLALKFSHDAYFYLGYQEQ MRDSVARIYPFWTPDIPLSSYVKGIYSFGLMETNFYDQAEKLAKEALSINPTDAWSVH TVAHIHEMKAEIKDGLEFMQHSETLWKDSDMLACHNYWHWALYLIEKGEYEAALTIYD THILPSLQANDAMLDVVDSCSMLYRLQMEGVSVGQRWQDVLPVARKHSRDHILLFNDA HFLMASLGAHDPQTTQELLTTLRDASESPGENCQHLLARDVGLPLCQALVEAEDGNPD RVLELLLPIRYRIVQLGGSNAQRDVFNQLLIHAALNCTSSVHKNVARSLLMERDALKP NSPLTERLIRKAATVHLMQ" BASE COUNT 579 a 724 c 698 g 580 t ORIGIN 1 ctccgacccg gcgcaacatg gccgcagcct cgcctctgcg cgactgccag gcctggaagg 61 atgcgaggct cccgctctcc accacaagca acgaagcctg caagctgttc gatgccacgc 121 tgacccagta tgtaaaatgg accaatgaca agagtctcgg tggcatcgag ggctgcctgt 181 caaagctcaa agcagcagat ccaacctttg tgatgggcca cgccatggct actggccttg 241 tgctgattgg cactggaagc tccgtgaagc tggacaaaga gctggacctg gctgtgaaga 301 caatggtgga gatttcaaga acccagccgc tgacaaggcg ggagcagctg cacgtgtctg 361 cagtagagac atttgccaat gggaactttc cgaaagcctg tgaactatgg gaacagattc 421 tccaggacca cccgacagac atgttggccc tgaaattttc ccatgatgct tatttttacc 481 tgggctatca ggaacagatg agagattctg ttgctcgaat ttaccccttc tggacacctg 541 acatccccct aagcagctat gtgaaaggca tctactcttt tggcttgatg gaaaccaact 601 tctacgacca ggcagaaaaa ctcgccaaag aggctttatc tattaacccg acagacgcat 661 ggtcggtgca caccgtcgct cacatccacg agatgaaagc agagatcaag gatgggttgg 721 aattcatgca gcactcagag accctctgga aggactctga tatgttggct tgtcataact 781 attggcactg ggctttatat ctgattgaga agggcgaata tgaggccgcg ctgaccatct 841 acgataccca catccttccc agcctgcagg ccaacgatgc aatgctggac gtggtggaca 901 gctgctccat gctctaccgc ctgcagatgg aaggagtgtc tgtgggccag cggtggcagg 961 atgtcctgcc tgtggcccgg aagcacagcc gagaccacat cctgctgttc aatgacgcac 1021 acttcctgat ggcatccctg ggtgcacacg acccccagac cacacaggag ctgctgacca 1081 ccctgcggga cgccagcgaa tccccagggg agaactgcca gcacctcctg gcccgagacg 1141 tggggctgcc cctgtgccag gccctggtgg aggctgagga cgggaaccct gaccgcgtcc 1201 tggagctgct cctgcccatc cgctaccgga tcgtccagct cggtgggagc aatgcccaga 1261 gagacgtctt caaccagctg ctgattcacg cggccttaaa ctgcacctcc agcgtccata 1321 agaacgtagc ccggagcctt ctgatggagc gtgatgcctt gaagcccaac tcgcccctga 1381 ccgagcggct catccgcaag gcagctaccg tccacctcat gcagtgagcc agcctggccg 1441 cctccaccct gcagaacctc agtggtggcg tcactgcgtc cagtcagctg ctccaccggg 1501 ttagggtcag gagacggcca gagcctgttt gttagggctg ttagagggtg atcttcagtt 1561 ttacaggaag tgggtcacgg gttaatttta aatgtgattc cgaatctcct ttcagtcctc 1621 gagaagggcc aatgagcatt tttcagcagt cacagccagt gtgagtgctg ctctttccac 1681 ctgccttgca aattctgttt cccaggggaa tgtgtctact gcctggtggt tcaaaggttg 1741 gaaggcaggg cagaggtggg ggctgattct gctgggacag gtcttccaga ggcagcctcc 1801 ccccactgcc tgtccccgtc cccaccaggc tgcccttggg atggaccttt tcattctttt 1861 ctttatattc tagacagtct ctgttgtctc attgtgttgc tgtcccattt ttcaggtgag 1921 ggtaccgggg taggggagtg gcctgcccag ggtcacacta tgagaggccc ccacctgctg 1981 cctttggacg cagccccctg ctgctgcatc caccaccctt cttacagatc agcgcgcaca 2041 tggggtcctt ctgctgtctc tggggcgagt cttggagccc cctggggggc tctgttggtg 2101 ctgatttgga cccgtttctc tttttaaact gcacatcata acagggcttc atgtcgagca 2161 tgattttaat cataaatgca cttctgaggt gcaaggattg agctcagagc tgctctgttg 2221 tggcaaaacc caaagtgctg tgatgtgtgg ctgtgacaag cctggagcgg gtcctgtgag 2281 cgccgcctct gtctcctgct tccccactga acgcctgctg aatgtgccgc tgactcagct 2341 gtgctgcttt cagccctcct gtgaggggcg gtcccagtgc acagatgttt ttcaagttcc 2401 tcagtttgta ctgaaattag ggattcatca gggcaggaag caggcaggcc tctcagaagg 2461 gagaggaggc ctccaaatct attgagtccc cacagtttgc tcaagcccag gcaaatttct 2521 gtgattaaaa tgaattcatc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2581 a //