LOCUS       BC018725                1668 bp    mRNA    linear   HUM 30-JAN-2008
DEFINITION  Homo sapiens integrator complex subunit 6, mRNA (cDNA clone
            IMAGE:2820536), complete cds.
ACCESSION   BC018725
VERSION     BC018725.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1668)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1668)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-DEC-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: DCTD/DTP
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 40 Row: a Column: 1
            This clone has the following problem: The cds is short compared to
            the longest cds in the locus.
FEATURES             Location/Qualifiers
     source          1..1668
                     /db_xref="H-InvDB:HIT000089688"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:2820536"
                     /tissue_type="Lung, small cell carcinoma"
                     /clone_lib="NIH_MGC_7"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1668
                     /gene="INTS6"
                     /gene_synonym="DBI-1"
                     /gene_synonym="DDX26A"
                     /gene_synonym="DICE1"
                     /gene_synonym="DKFZP434B105"
                     /gene_synonym="HDB"
                     /gene_synonym="INT6"
                     /gene_synonym="Notchl2"
                     /db_xref="GeneID:26512"
                     /db_xref="HGNC:HGNC:14879"
                     /db_xref="MIM:604331"
     CDS             491..838
                     /gene="INTS6"
                     /gene_synonym="DBI-1"
                     /gene_synonym="DDX26A"
                     /gene_synonym="DICE1"
                     /gene_synonym="DKFZP434B105"
                     /gene_synonym="HDB"
                     /gene_synonym="INT6"
                     /gene_synonym="Notchl2"
                     /codon_start=1
                     /product="integrator complex subunit 6"
                     /protein_id="AAH18725.1"
                     /db_xref="GeneID:26512"
                     /db_xref="HGNC:HGNC:14879"
                     /db_xref="MIM:604331"
                     /translation="MPILLFLIDTSASMNQRSHLGTTYLDTAKGAVETFMKLRARDPA
                     SRGDRYMLVTFEEPPYAIKAGWKENHATFMNELKNLQAEGLTTLGQSLRTAFDLLNLN
                     RLVTGIDNYGQVG"
BASE COUNT          481 a          400 c          383 g          404 t
ORIGIN      
        1 gagaaagtgg tgacaccgcc ggggtgcgga gggagtccct gaaacttctc ccaacagccc
       61 cagggccaat cttccctcag cccactcccc tcttcgccag ctcccaggtc cccactcctg
      121 taccgggggt ggggtgggga gccaggcccg tctcccgctg ggacacacac aggggccggg
      181 agcggggacg ggacccccga ggcggggggg acgaaccgac agacagacgg ctgggcgccc
      241 gccccagcgg gcaggcaggc aggaggaggc ggaggcgggg gtacgacggg gagcactggg
      301 tctggggagt ttcctctcaa ctatcggggg agaaactccc cgcagccgga ggaaagaccc
      361 agacagtgtt ttcctcccgg gggccgtgct cccccgcccc gcgtagcggc ggtcgccgcc
      421 accggcgcct ccacctctac catctcctct ttctccacca cctcgggccc cggtgtcccc
      481 ggccagcact atgcccatct tactgttcct gatagacacg tctgcctcta tgaaccagcg
      541 cagccatctg ggcaccacct acctggacac ggccaaaggc gcggtagaga ccttcatgaa
      601 gctccgtgcc cgggaccctg ccagcagagg agacaggtat atgctggtca ctttcgaaga
      661 gccgccctat gctatcaagg ctggatggaa agaaaaccat gcaacgttta tgaatgaatt
      721 gaaaaacctt caggctgaag gacttacgac tcttggccaa tccctaagga cagcttttga
      781 tttattaaat ttaaatagat tagtaactgg catagacaac tatgggcagg taggttgaat
      841 aataaggtgg caaaatagtt gatttttcat tttgtggaaa aacacagtcc agtccaaaaa
      901 ctacataaca tgaaatgcaa gtataaaaca ttccaaatta aaatagaata tgcacattgt
      961 tcaaaggcaa aactcttacc ctactatata tattttacat ccctcatttt ttccccctct
     1021 aaaatgcatt ggtattcagg attagaatct gaatcttttg ctataaagtt gacatacatt
     1081 ggttttaatc ccttgaaagt tcagtaaaga cctaaaagga aaagcatcct accacaccac
     1141 actcatgttg tatgtgcaac tattatagtg gcttagagac actagttcgt gttcttcgtt
     1201 tctatattag taaagatgtt agaggaaatt aatctgtttg ttgcatcagg gtttaatgtg
     1261 accatgttgt ataactattc tgaaaggtaa gaagtttttc actggagtac agtcactggc
     1321 tgagaacatt taagttttct tttgaagcat acacagttaa caactattgc aggaagaact
     1381 ctgaattaaa tttcaggccc agagttttga tttaaactcc aaacccttgg aaaaaaagac
     1441 tgctggaaaa tatgaaagaa cccttcgttt cttaaccccc acaagtcctt ttattgcact
     1501 tactttcatg tatttgagga tgagaggagc tttaaatcaa caataattca ctaaggaata
     1561 atgcaaggtg gtctattgta acattttatg atattattgc cctggaaata aaagatactg
     1621 aacaatgtat aatgttacat gtaaaaaaaa aaaaaaaaaa aaaaaaaa
//