LOCUS BC018725 1668 bp mRNA linear HUM 30-JAN-2008 DEFINITION Homo sapiens integrator complex subunit 6, mRNA (cDNA clone IMAGE:2820536), complete cds. ACCESSION BC018725 VERSION BC018725.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1668) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1668) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 40 Row: a Column: 1 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1668 /db_xref="H-InvDB:HIT000089688" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:2820536" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1668 /gene="INTS6" /gene_synonym="DBI-1" /gene_synonym="DDX26A" /gene_synonym="DICE1" /gene_synonym="DKFZP434B105" /gene_synonym="HDB" /gene_synonym="INT6" /gene_synonym="Notchl2" /db_xref="GeneID:26512" /db_xref="HGNC:HGNC:14879" /db_xref="MIM:604331" CDS 491..838 /gene="INTS6" /gene_synonym="DBI-1" /gene_synonym="DDX26A" /gene_synonym="DICE1" /gene_synonym="DKFZP434B105" /gene_synonym="HDB" /gene_synonym="INT6" /gene_synonym="Notchl2" /codon_start=1 /product="integrator complex subunit 6" /protein_id="AAH18725.1" /db_xref="GeneID:26512" /db_xref="HGNC:HGNC:14879" /db_xref="MIM:604331" /translation="MPILLFLIDTSASMNQRSHLGTTYLDTAKGAVETFMKLRARDPA SRGDRYMLVTFEEPPYAIKAGWKENHATFMNELKNLQAEGLTTLGQSLRTAFDLLNLN RLVTGIDNYGQVG" BASE COUNT 481 a 400 c 383 g 404 t ORIGIN 1 gagaaagtgg tgacaccgcc ggggtgcgga gggagtccct gaaacttctc ccaacagccc 61 cagggccaat cttccctcag cccactcccc tcttcgccag ctcccaggtc cccactcctg 121 taccgggggt ggggtgggga gccaggcccg tctcccgctg ggacacacac aggggccggg 181 agcggggacg ggacccccga ggcggggggg acgaaccgac agacagacgg ctgggcgccc 241 gccccagcgg gcaggcaggc aggaggaggc ggaggcgggg gtacgacggg gagcactggg 301 tctggggagt ttcctctcaa ctatcggggg agaaactccc cgcagccgga ggaaagaccc 361 agacagtgtt ttcctcccgg gggccgtgct cccccgcccc gcgtagcggc ggtcgccgcc 421 accggcgcct ccacctctac catctcctct ttctccacca cctcgggccc cggtgtcccc 481 ggccagcact atgcccatct tactgttcct gatagacacg tctgcctcta tgaaccagcg 541 cagccatctg ggcaccacct acctggacac ggccaaaggc gcggtagaga ccttcatgaa 601 gctccgtgcc cgggaccctg ccagcagagg agacaggtat atgctggtca ctttcgaaga 661 gccgccctat gctatcaagg ctggatggaa agaaaaccat gcaacgttta tgaatgaatt 721 gaaaaacctt caggctgaag gacttacgac tcttggccaa tccctaagga cagcttttga 781 tttattaaat ttaaatagat tagtaactgg catagacaac tatgggcagg taggttgaat 841 aataaggtgg caaaatagtt gatttttcat tttgtggaaa aacacagtcc agtccaaaaa 901 ctacataaca tgaaatgcaa gtataaaaca ttccaaatta aaatagaata tgcacattgt 961 tcaaaggcaa aactcttacc ctactatata tattttacat ccctcatttt ttccccctct 1021 aaaatgcatt ggtattcagg attagaatct gaatcttttg ctataaagtt gacatacatt 1081 ggttttaatc ccttgaaagt tcagtaaaga cctaaaagga aaagcatcct accacaccac 1141 actcatgttg tatgtgcaac tattatagtg gcttagagac actagttcgt gttcttcgtt 1201 tctatattag taaagatgtt agaggaaatt aatctgtttg ttgcatcagg gtttaatgtg 1261 accatgttgt ataactattc tgaaaggtaa gaagtttttc actggagtac agtcactggc 1321 tgagaacatt taagttttct tttgaagcat acacagttaa caactattgc aggaagaact 1381 ctgaattaaa tttcaggccc agagttttga tttaaactcc aaacccttgg aaaaaaagac 1441 tgctggaaaa tatgaaagaa cccttcgttt cttaaccccc acaagtcctt ttattgcact 1501 tactttcatg tatttgagga tgagaggagc tttaaatcaa caataattca ctaaggaata 1561 atgcaaggtg gtctattgta acattttatg atattattgc cctggaaata aaagatactg 1621 aacaatgtat aatgttacat gtaaaaaaaa aaaaaaaaaa aaaaaaaa //