LOCUS BC018704 2906 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens phosphatidylinositol transfer protein, beta, mRNA
(cDNA clone MGC:20420 IMAGE:4643509), complete cds.
ACCESSION BC018704
VERSION BC018704.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2906)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2906)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: l Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51873061.
FEATURES Location/Qualifiers
source 1..2906
/db_xref="H-InvDB:HIT000038406"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20420 IMAGE:4643509"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2906
/gene="PITPNB"
/gene_synonym="PI-TP-beta"
/gene_synonym="PtdInsTP"
/gene_synonym="VIB1B"
/db_xref="GeneID:23760"
/db_xref="HGNC:HGNC:9002"
/db_xref="MIM:606876"
CDS 40..855
/gene="PITPNB"
/gene_synonym="PI-TP-beta"
/gene_synonym="PtdInsTP"
/gene_synonym="VIB1B"
/codon_start=1
/product="phosphatidylinositol transfer protein, beta"
/protein_id="AAH18704.1"
/db_xref="GeneID:23760"
/db_xref="HGNC:HGNC:9002"
/db_xref="MIM:606876"
/translation="MVLIKEFRVVLPCSVQEYQVGQLYSVAEASKNETGGGEGIEVLK
NEPYEKDGEKGQYTHKIYHLKSKVPAFVRMIAPEGSLVFHEKAWNAYPYCRTIVTNEY
MKDDFFIKIETWHKPDLGTLENVHGLDPNTWKTVEIVHIDIADRSQVEPADYKADEDP
ALFQSVKTKRGPLGPNWKKELANSPDCPQMCAYKLVTIKFKWWGLQSKVENFIQKQEK
RIFTNFHRQLFCWIDKWIDLTMEDIRRMEDETQKELETMRKRGSVRGTSAADV"
BASE COUNT 906 a 512 c 636 g 852 t
ORIGIN
1 cggtggtatc ggcggcagct gtgagggggt tccgggaaga tggtgctgat caaggaattc
61 cgtgtggttt tgccatgttc tgttcaggag tatcaggttg ggcagcttta ctctgttgca
121 gaagctagta agaatgagac tggtggtgga gaaggaattg aagtcttaaa gaatgaacct
181 tatgagaagg atggagaaaa gggacagtat acgcacaaaa tttatcacct aaagagcaaa
241 gtgcctgcat tcgtgaggat gattgctccc gagggctcct tggtgtttca tgagaaagcc
301 tggaatgcgt acccctactg tagaacaatt gtaacgaatg aatatatgaa agatgatttc
361 ttcattaaaa tcgaaacatg gcacaaacca gacttgggaa cattagaaaa tgtacatggt
421 ttagatccaa acacatggaa aactgttgaa attgtccata tagatattgc agatagaagt
481 caagttgaac cagcagacta caaagctgat gaagacccag cattattcca gtcagtcaag
541 accaagagag gccctttggg acccaactgg aagaaggagc tggcaaacag ccctgactgt
601 ccccagatgt gtgcctataa gctggtgacc atcaaattca agtggtgggg actgcaaagc
661 aaagtagaaa acttcattca aaagcaagaa aaacggatat ttacaaactt ccatcgccag
721 cttttttgtt ggattgacaa gtggatcgat ctcacgatgg aagacattag gagaatggaa
781 gacgagactc agaaagaact agaaacaatg cgtaagaggg gttccgttcg aggcacgtcg
841 gctgctgatg tctagatgag tcccctgtag ggtcagagac aatgtcaaac tgtttacgta
901 atcaaggtca agtgagggga acaagcgcag ccagtgatga gtgaagaaga atctgaccag
961 tatcttgcag tgttgacgtt tcccagatgt gtgcttgtga tgatacacac acatgcacag
1021 gttctcaacc acgtgtgtat atatgtatgt gtgcatatgt ctgtagctgt atataaagcg
1081 catgtagagc tacagatcca gatacacaca cttgtgtata tatgtacata cagacatact
1141 gaagggatta gtacaatttc tccaaagtac tgtacctatc ttcagcaaga atgcaaaaga
1201 aaatattttc aatatatata cctggaacag attttaataa ttatcagagt aataccatta
1261 atggacaaat tgactgcaat gtaatactag ctggtatgtt tcataaatgt caagctgtgg
1321 accaacatat atagcctttt attatttttc tcttctttta agtcagtctg ttataaattt
1381 ttttttagtc ccataagcag tagactccca cagaaaattt cttcaaaatt ttttggtgtt
1441 ccaatgaatc tgggatgtaa actctgaatg tatttataac tatttatttc tggatggtca
1501 ttatcttgta gccaaatttg acaatataaa gtaaggagca aagttacagg ccagttttta
1561 cttgtttgcc ctgagggaaa aatcctttta aaaaaaattt ctggttttta ttggattttt
1621 gtattttaaa tttcaaatat ttttctacat caaacctagc aaaaatggag atgacggttt
1681 ctgatttata ataaatacta gacagttttc aggctcctgt tagacaaaca cattgatgaa
1741 gaaattagtc ttaataggat tgtaggctgt gtagaaaagt tggaaatata gcacttcatg
1801 gagtcttgtt ttgaagatga cagttttctg taactacagc ttggaaacta tgcaaatggt
1861 ctagattcct cagagctcac atgataggat atagttagtg atgacatttt gctcttcttg
1921 tgggaacaca cacttcaagg aggagatagt gactttgaga taggaacagt ttaagatgca
1981 gtgtgagtct ggcctgcgtg cggtgaggag gccccgccaa gagactggtg gacatctgac
2041 tgtgggatgt gctctcaagt aggacgtcat caggacagat tctgaatagg catcatgaga
2101 gtgctggtca gaaacggctg ccactttttt taatttaatt ttatttttta tttaaaggaa
2161 ggaacaatag ctaggtaaga tttttatcag ctttctctgt ctgaatccag tttttcctct
2221 gtcagtcctg gaagcttgaa tagaattata ttgttgaagc cttcaggtca caaactgtct
2281 tttgtaacct cctgtccctc ctaaaacacg ccaacccctg cagtcaaatc acattagtaa
2341 tctgatttgc tgacagtcct gccctgcctg ctcctcgttt tcccacatgt cctgcatccc
2401 tcccccactg gagtgatttc agtgaatcag acaaggaagg atgtgtagga tcactactgc
2461 attgcaatac cctgttatcc tcagcaacaa aacccacatt tcatacatcc tttgtgtact
2521 caggataaag actgatgttt actctctggg cactgttgta agataggttt tgtcagagca
2581 taatcattgt ctgcaaagtg tttggtgcga ggaagattat tgctaatttt gtgaaataaa
2641 gagtctagcc ctctcctttt aatgaactta actctcgctg gcatctgtag tatcattggg
2701 agcttaggcg cacatggaaa tgagagcccg gcgcatggat tttaatgttt ttctaacaac
2761 tgtggagatt tgagggaatg tgtggtgaat gtaaaatacc tagtttactt gccagtctct
2821 tgtgtaaatt acagtaaaac aaagtaaatg aaatttaaac aaaaaataaa tttgatcaca
2881 aaatgaaaaa aaaaaaaaaa aaaaaa
//