LOCUS BC018661 940 bp mRNA linear HUM 03-FEB-2004
DEFINITION Homo sapiens AT rich interactive domain 2 (ARID, RFX-like), mRNA
(cDNA clone IMAGE:4105114), partial cds.
ACCESSION BC018661
VERSION BC018661.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 940)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 940)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 32 Row: d Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..940
/db_xref="H-InvDB:HIT000089662"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4105114"
/tissue_type="Bone marrow, acute myelogenous leukemia"
/clone_lib="NIH_MGC_55"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..940
/gene="ARID2"
/gene_synonym="DKFZp686G052"
/gene_synonym="FLJ30619"
/gene_synonym="KIAA1557"
/db_xref="GeneID:196528"
CDS <1..716
/gene="ARID2"
/gene_synonym="DKFZp686G052"
/gene_synonym="FLJ30619"
/gene_synonym="KIAA1557"
/codon_start=3
/product="ARID2 protein"
/protein_id="AAH18661.1"
/db_xref="GeneID:196528"
/translation="AAVQVQGQPNSSQPSPFSGSSQPGDPMRKPGQNFMCLWQSCKKW
FQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRFSFITHLQDKHCSKDALLAGL
KQDEPGQAGSQKSSTKQPTVGGTSSTPRAQKAIVNHPSAALMALRRGSRNLVFRDFTD
EKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVLAISNMEASSTLAKCLY
ELNFTVQSKEQEKDSEMLQ"
BASE COUNT 325 a 192 c 192 g 231 t
ORIGIN
1 gggcagctgt acaagtgcag ggccagccta acagttctca gccttctcca ttcagtggat
61 ccagtcagcc tggagatcca atgagaaaac ctggacagaa cttcatgtgt ctgtggcagt
121 cttgtaaaaa gtggtttcag acaccctcac aggttttcta ccatgcagca actgaacatg
181 gaggaaaaga tgtatatcca gggcagtgtc tttgggaagg ttgtgagcct tttcagcgac
241 agcggttttc ttttattacc cacttgcagg ataagcactg ttcaaaggat gccctacttg
301 caggattaaa acaagatgaa ccaggacaag caggaagtca gaagtcttct accaagcagc
361 caactgtagg gggcacaagc tcaactccta gagcacaaaa ggccattgtg aatcatccca
421 gtgctgcact tatggctctg aggagaggat caagaaacct tgtctttcga gattttacag
481 atgaaaaaga gggaccaata actaaacaca tccgactaac agctgcctta atattaaaaa
541 atattggtaa atattcagaa tgtggtcgca gattgttaaa gagacatgaa aataacttat
601 cagtgctagc cattagtaac atggaagctt cctccaccct tgccaaatgc ctttatgaac
661 ttaattttac agttcagagt aaggaacaag aaaaagactc agaaatgctg cagtgaaaaa
721 taattccact tacacagtgg gggactcaaa gtcagccaca tttcacatac tgttactgaa
781 gaaagcacca agtcttaatg gaacaaagac catagaatga attattttat ctcctcccat
841 gatgctgaga ggaagcttcg tattctgatc tctgagtgaa tccctttgtt ctctgtttaa
901 aaaaatctaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//