LOCUS BC018620 827 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens poly (ADP-ribose) polymerase 1, mRNA (cDNA clone
IMAGE:5015448), partial cds.
ACCESSION BC018620
VERSION BC018620.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 827)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 827)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: o Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11496989.
FEATURES Location/Qualifiers
source 1..827
/db_xref="H-InvDB:HIT000089646"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5015448"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>827
/gene="PARP1"
/gene_synonym="ADPRT1"
/gene_synonym="pADPRT-1"
/gene_synonym="PARP"
/gene_synonym="PARP-1"
/db_xref="GeneID:142"
/db_xref="HGNC:HGNC:270"
/db_xref="MIM:173870"
CDS 132..>827
/gene="PARP1"
/gene_synonym="ADPRT1"
/gene_synonym="pADPRT-1"
/gene_synonym="PARP"
/gene_synonym="PARP-1"
/codon_start=1
/product="PARP1 protein"
/protein_id="AAH18620.1"
/db_xref="GeneID:142"
/db_xref="HGNC:HGNC:270"
/db_xref="MIM:173870"
/translation="MAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMF
DGKVPHWYHFSCFWKVGHSIRHPDVEVDGFSELRWDDQQKVKKTAEAGGVTGKGQDGI
GSKAEKTLGDFAAEYAKSNRSTCKGCMEKIEKGQVRLSKKMVDPEKPQLGMIDRWYHP
GCFVKNREELGFRPEYSASQLKGFSLLATEDKEALKKQLPGVKSEGKRKGDEVDGVDE
VAKKKSKKKKKKKK"
BASE COUNT 218 a 182 c 284 g 143 t
ORIGIN
1 ggcgtgttcg gtggcggctc tggccgctca ggcgcctgcg gctgggtgag cgcacgcgag
61 gcggcgaggc ggcagcgtgt ttctaggtcg tggcgtcggg cttccggagc tttggcggca
121 gctaggggag gatggcggag tcttcggata agctctatcg agtcgagtac gccaagagcg
181 ggcgcgcctc ttgcaagaaa tgcagcgaga gcatccccaa ggactcgctc cggatggcca
241 tcatggtgca gtcgcccatg tttgatggaa aagtcccaca ctggtaccac ttctcctgct
301 tctggaaggt gggccactcc atccggcacc ctgacgttga ggtggatggg ttctctgagc
361 ttcggtggga tgaccagcag aaagtcaaga agacagcgga agctggagga gtgacaggca
421 aaggccagga tggaattggt agcaaggcag agaagactct gggtgacttt gcagcagagt
481 atgccaagtc caacagaagt acgtgcaagg ggtgtatgga gaagatagaa aagggccagg
541 tgcgcctgtc caagaagatg gtggacccgg agaagccaca gctaggcatg attgaccgct
601 ggtaccatcc aggctgcttt gtcaagaaca gggaggagct gggtttccgg cccgagtaca
661 gtgcgagtca gctcaagggc ttcagcctcc ttgctacaga ggataaagaa gccctgaaga
721 agcagctccc aggagtcaag agtgaaggaa agagaaaagg cgatgaggtg gatggagtgg
781 atgaagtggc gaagaagaaa tctaaaaaaa aaaaaaaaaa aaaaaaa
//