LOCUS BC018605 1682 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, alpha type,
5, mRNA (cDNA clone IMAGE:3925105), with apparent retained intron.
ACCESSION BC018605
VERSION BC018605.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1682)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1682)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: g Column: 2
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1682
/db_xref="H-InvDB:HIT000089639"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3925105"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 477 a 320 c 380 g 505 t
ORIGIN
1 ccacatcggc ggcacttgtc ctaccgctga gtcacccctg ggtcctaact cggtgcggaa
61 gcgagaagct ccggctggtg cttggtaaag aaggcgtgag gagccggaac tcctaccttg
121 aacccggaga aggccaaggg tcactctttg ctccgttcat cttttcgtgc ctagtatgac
181 tgccttgaac aaacaaacaa aaagttaaac gtgcttcctg gaagaaaaag caactggttt
241 gtagtagggc atgctgcggt gtatagtttc ttcagaagcg cgaaggcagt cgtagctttg
301 gctggatata ttgtctggag tctgatttta taggaactgg aatttagaat ggttttcaag
361 agatttctca tcatgccgat tccaattgac caaaattttt tctgactttt taaaagttta
421 aagcaagttt taaaaaactt ttgtggtatg aaaatgttca caatattaag ttgtacatat
481 atatgctgta gacattttta ctttcagttt ctgttttcgt cagttaagtt tttacatagc
541 tactcttttt taaagtcagg gaaggcagac attttctttg tactgagtgg tatgagatgc
601 tgcatttcct gtcaagtata tgctgatcct gtcgaagttt taccacctgc agttaccact
661 ttttcatctt ttttactgac tcgtagaaga tgtgtgtgaa gttttgacat atttccccac
721 tgtcctataa agtgactttg ttggtcgata tttaacttcc agaacattga agagaatcat
781 cttcgggtga cataattttg agttaggggg cgtgaatact ttttctcccg aaggaagatt
841 atttcaagtg gaatatgcca ttgaggctat caagcttggt tctacagcca ttgggatcca
901 gacatcagag ggtgtgtgcc tagctgtgga gaagagaatt acttccccac tgatggagcc
961 cagcagcatt gagaaaattg tagagattga tgctcacata ggttgtgcca tgagtgggct
1021 aattgctgat gctaagactt taattgataa agccagagtg gagacacaga accactggtt
1081 cacctacaat gagacaatga cagtggagag tgtgacccaa gctgtgtcca atctggcttt
1141 gcagtttgga gaagaagatg cagatccagg tgccatgtct cgtccctttg gagtagcatt
1201 attatttgga ggagttgatg agaaaggacc ccagctgttt catatggacc catctgggac
1261 ctttgtacag tgtgatgctc gagcaattgg ctctgcttca gagggtgccc agagctcctt
1321 gcaagaagtt taccacaagt ctatgacttt gaaagaagcc atcaagtctt cactcatcat
1381 cctcaaacaa gtaatggagg agaagctgaa tgcaacaaac attgagctag ccacagtgca
1441 gcctggccag aatttccaca tgttcacaaa ggaagaactt gaagaggtta tcaaggacat
1501 ttaaggaatc ctgatcctca gaacttctct gggacaattt cagttctaat aatgtcctta
1561 aattttattt ccagctcctg ttccttggaa aatctccatt gtatgtgcat tttttaaatg
1621 atgtctgtac ataaaggcag ttctgaaata aagaaaattt taaaataaaa aaaaaaaaaa
1681 aa
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