LOCUS BC018540 2570 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens coiled-coil domain containing 15, mRNA (cDNA clone
IMAGE:4385393), partial cds.
ACCESSION BC018540
VERSION BC018540.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2570)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2570)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: o Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376518.
FEATURES Location/Qualifiers
source 1..2570
/db_xref="H-InvDB:HIT000089621"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4385393"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>2570
/gene="CCDC15"
/gene_synonym="FLJ13215"
/db_xref="GeneID:80071"
/db_xref="HGNC:HGNC:25798"
CDS 174..>2570
/gene="CCDC15"
/gene_synonym="FLJ13215"
/codon_start=1
/product="CCDC15 protein"
/protein_id="AAH18540.1"
/db_xref="GeneID:80071"
/db_xref="HGNC:HGNC:25798"
/translation="MLGSMARKKPRNTSRLPLALNPLKSKDVLAVLAERNEAIVPVGA
WVEPASPGSSEIPAYTSAYLIEEELKEQLRKKQEALKHFQKQVKYRVNQQIRLRKKQQ
LQKSYERAQKEGSIAMQSSATHLTSKRTSVFPNNLNVAIGSSRLPPSLMPGDGIEDEE
NQNELFQQQAQALSETMKQARHRLASFKTVIKKKGSVFPDDGRKSFLTREEVLSRKPA
STGINTGIRGELPIKVHQGLLAAVPYQNYMENQELDYEEPDYEESSSLVTDEKGKEDL
FGRGQQDQQAIHSEDKNKPFSRVQKVKFKNPLFVLMEEEEQKQLHFEGLQDILPEAQD
YFLEAQGDLLETQGDLTGIQSVKPDTQAVEMKVQVTEPEGQAIEPEGQPIKTETQGIM
LKAQSIELEEGSIVLKTQDFLPTNQALLTKNQDVLLKDHCVLPKDQSILLKYQDQDFL
PRDQHVLHKDQDILPKYQDQNFLPKDQNFLSRDQHVLPKDQDILPKYQDQNFLPKDQN
FLSRDQHVLPKDQNILPKYQGQDFLPKDQDFLSRDQHVLPKDWNILPKCQDQDFLPRD
QGVLPKDQNILPICQDQDFLPRDQGYLPKDQNILPICQDRDFLPRDLHVLSNDQNILP
KCQDQDFLPKYQKVHFKEPYSDMTDEKGREDFSLADYQCLPPKSQDQDDIKNQQPASF
MREERVREELPLDYHQYVVPKIQDQDSPREQNKHIKLPSSFEKWEIARGNTPGVPLAY
DRYQSGLSTEFQAPLAFQSDVDKEEDKKERQKQYLRHRRLFMDIEREQVKEQQRQKKK
K"
BASE COUNT 865 a 560 c 554 g 591 t
ORIGIN
1 gagtctgtgg cgagctgcgg gccgattcct ggccagtgcc atctcagccg gagcaggcct
61 cggggcctca gaagcaggct tttatctggc ccgaggctcc cagccgttca gcgcgtcttc
121 ccataaccta taccgattat tgggactctc ggctgcagac acaggagtca cagatgctgg
181 gaagtatggc ccgaaagaaa cctcgaaata cctcaaggtt gcccctggct ttaaaccccc
241 tgaagagcaa ggacgtgttg gcagtgctgg ctgagaggaa cgaggctata gtaccagttg
301 gggcatgggt ggaacctgcc tcaccaggta gttcggaaat cccagcatat acatcagcat
361 atttaattga agaagaacta aaggaacagc taagaaaaaa acaagaagct ttgaaacatt
421 ttcagaaaca agttaaatac cgagtaaatc aacaaattag gttgagaaaa aagcaacagc
481 ttcagaagtc ttatgaaaga gcacaaaaag aaggctccat agccatgcag tcttcagcaa
541 cacacttaac ttccaaaagg acaagtgttt ttccaaacaa tttgaatgtt gctattggaa
601 gttctaggtt acctccttcc ctgatgcctg gggatggaat agaggatgaa gagaatcaga
661 acgaattatt ccaacaacaa gcccaggctc ttagtgaaac tatgaaacag gcacgtcacc
721 ggctagcatc ctttaaaacc gtgattaaaa aaaagggatc agtgtttcca gatgatggaa
781 ggaaaagctt tcttaccaga gaggaagtgc tttccaggaa accagcatcc actgggataa
841 atacaggaat aagaggagag ttgcccatta aggtccatca aggtctttta gctgctgtac
901 cttaccagaa ttatatggaa aatcaggaac ttgactatga ggaacctgac tatgaggaat
961 cttcatctct tgtaactgat gagaaaggga aagaagattt gtttgggaga ggccagcagg
1021 accagcaggc tatccattct gaagataaga acaaaccttt cagcagagtt cagaaagtaa
1081 aattcaaaaa tccattattt gttctgatgg aagaggaaga acaaaagcag ttacattttg
1141 agggccttca ggatattctg ccagaagccc aggattattt tctagaagcc caaggtgatt
1201 tgctggaaac ccagggtgat ttgacaggaa tccagagtgt taagccagat acccaggctg
1261 ttgaaatgaa ggttcaggtt actgagccag aaggccaggc cattgagcca gaaggccagc
1321 ctattaagac agaaactcag ggtattatgc tgaaagccca gagtattgag ctagaagaag
1381 ggagtattgt gttgaaaacc caggattttc tacccacaaa tcaggctctt ctaacgaaaa
1441 accaggatgt tttactcaaa gaccactgtg ttctccctaa agaccagagt attctactca
1501 aatatcagga ccaggacttc ctacccagag accagcatgt tctccacaaa gaccaagata
1561 ttctgccaaa atatcaggac cagaattttc tacctaagga ccagaatttt ttatctagag
1621 accagcatgt tctccccaaa gaccaagata ttctgccaaa atatcaggac cagaattttc
1681 tacctaagga ccagaatttt ttgtctagag accagcatgt tctccccaaa gaccagaata
1741 ttctacctaa atatcaaggc caggattttc tacctaaaga ccaggacttt ttatctagag
1801 accagcatgt tctccccaaa gactggaata ttctacccaa atgtcaggac caggattttc
1861 tacccagaga ccaaggtgtt cttcccaaag accaaaatat tctacccata tgtcaggacc
1921 aggattttct acccagagac caaggttatc ttcctaaaga ccaaaatatt ctacccatat
1981 gtcaggaccg ggattttcta cccagagacc tgcatgttct ctccaacgac cagaatattc
2041 tacccaaatg tcaggatcaa gattttctac caaaatatca gaaagtacac tttaaggagc
2101 catactctga tatgacagat gagaaaggga gagaagactt ttctctggca gactatcagt
2161 gtttgcctcc caaatcccag gaccaggatg acatcaaaaa tcagcaaccc gcatctttta
2221 tgagagaaga aagagtgaga gaagaattgc ctctggacta tcatcaatat gttgtaccta
2281 aaatccagga ccaagactcc cctagagaac agaacaagca tatcaaacta ccctcatctt
2341 ttgagaaatg ggagattgca agaggaaata ctcctggagt gcccttggct tatgataggt
2401 atcaatcagg attgagcact gaattccaag ctccactggc atttcagtct gacgtggata
2461 aagaagaaga taagaaagag cgtcaaaagc agtacctgag acatagacga cttttcatgg
2521 atattgagag agaacaagtt aaagaacaac aaaggcaaaa aaaaaaaaaa
//