LOCUS BC018288 2232 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAB5A, member RAS oncogene family, mRNA (cDNA clone
MGC:17504 IMAGE:3454268), complete cds.
ACCESSION BC018288
VERSION BC018288.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2232)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2232)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: d Column: 3.
FEATURES Location/Qualifiers
source 1..2232
/db_xref="H-InvDB:HIT000038324"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17504 IMAGE:3454268"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2232
/gene="RAB5A"
/db_xref="GeneID:5868"
/db_xref="HGNC:HGNC:9783"
/db_xref="MIM:179512"
CDS 219..866
/gene="RAB5A"
/codon_start=1
/product="RAB5A, member RAS oncogene family"
/protein_id="AAH18288.1"
/db_xref="GeneID:5868"
/db_xref="HGNC:HGNC:9783"
/db_xref="MIM:179512"
/translation="MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQ
FHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDI
TNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFM
ETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN"
BASE COUNT 727 a 412 c 432 g 661 t
ORIGIN
1 ctaagagcag gcgacgccgc cgccgccacc accaccgcca tagatacact ctcatcctac
61 gggccacgcc tgggccttgc tgccaggaag cttcggcccc gcagctcggc ttgctgcggt
121 ctcaggtttc tttacctcca gaaagaagaa tattggcccc ttgaattctg gaagttcatt
181 gaagagtctg aaattaggga cttatttcaa atttggacat ggctagtcga ggcgcaacaa
241 gacccaacgg gccaaatact ggaaataaaa tatgccagtt caaactagta cttctgggag
301 agtccgctgt tggcaaatca agcctagtgc ttcgttttgt gaaaggccaa tttcatgaat
361 ttcaagagag taccattggg gctgcttttc taacccaaac tgtatgtctt gatgacacta
421 cagtaaagtt tgaaatatgg gatacagctg gtcaagaacg ataccatagc ctagcaccaa
481 tgtactacag aggagcacaa gcagccatag ttgtatatga tatcacaaat gaggagtcct
541 ttgcaagagc aaaaaattgg gttaaagaac ttcagaggca agcaagtcct aacattgtaa
601 tagctttatc gggaaacaag gccgacctag caaataaaag agcagtagat ttccaggaag
661 cacagtccta tgcagatgac aatagtttat tattcatgga gacatccgct aaaacatcaa
721 tgaatgtaaa tgaaatattc atggcaatag ctaaaaaatt gccaaagaat gaaccacaaa
781 atccaggagc aaattctgcc agaggaagag gagtagacct taccgaaccc acacaaccaa
841 ccaggaatca gtgttgtagt aactaaacct ctagtttgaa ctagctggaa tagtcttctg
901 cttcctaaat gttaataaca atggaattgg agcatttaac cagcccagta tgacttccaa
961 aagaagagac ttatgataga gtcaagtttc taatacagaa ttattttaag tgttttgaac
1021 ttaattttta ataacatgca tgggtccctc tcactaatgt ttcaacaata gggaaaaatg
1081 agaactatgt ggacacttgt ttcattggaa ggttaggggg aataatttct catcactagg
1141 aatatagaca aatgactgtc tgggcccaca cagttaacca gcccatttct ccacactggt
1201 acagtagtca cctgtgaaaa aaaaaattgg aacttactaa tttgggcttt tcaaaaacat
1261 tctttgttta gaaggagatt ctaaagttat ttatgatgct tagccatagt attcaggcaa
1321 atgttcattt ctcctggtac ctgtatttaa aatgtacatt ccacatttta ataaattaac
1381 cacaagaaaa taatcccaca tatacaaggt caggggtggg gaagagtatt aatggtatct
1441 taattatacc cagtctggtt tttttttttt aaatggggta aaaatcaaat gcaaccccat
1501 cttgttttag gaattttgag aactaataaa tgcaccttaa tggtcagtgt tcctttcaaa
1561 catgtgagtt ctttaacaaa aatgaaataa accaggtgtc tgtgatttct aattaatcac
1621 cgctggccat tacacaggtt ttgttgtttg gggtggggag ggggcttttg ttcccttttg
1681 acataatata gtcaatgcac taacaattat gtatattcaa acttgattat tttaaattcg
1741 atcttcagct gtactgtaaa tagggtactg cattgtagtc tccatatctg tattactttt
1801 ctgtaatatt taagagttgc ttaaaagcat acaaaatgta ctgttactaa aacagctaat
1861 tatttctctc tccccctttg acaggaaggg gcttcagttg ttcctccatg gctagaacca
1921 taataaacaa tgtacccgta atttgtaaca taaagtattg caatatgtta gtaacaatct
1981 tgcagccttc ctttccaaag ttcattttat tttgatcagt tcagtatatt gcactaatta
2041 ttttaggtat tttcattata tgaaagctac catgtgtcag agatgattta atctatttaa
2101 gtgttggact gctaggagaa cttgtacatt tatgataatg cagaattagg aaaacggttc
2161 accagtgttt agttttatat tgaggtgctc aggttggaat aaagtggtat aaaaagcaaa
2221 aaaaaaaaaa aa
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