LOCUS BC018148 1647 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens TSC22 domain family, member 3, mRNA (cDNA clone
IMAGE:3851403), complete cds.
ACCESSION BC018148
VERSION BC018148.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1647)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1647)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: n Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62865624
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1647
/db_xref="H-InvDB:HIT000038297"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3851403"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1647
/gene="TSC22D3"
/gene_synonym="DIP"
/gene_synonym="GILZ"
/gene_synonym="hDIP"
/gene_synonym="TSC-22R"
/db_xref="GeneID:1831"
/db_xref="HGNC:HGNC:3051"
/db_xref="MIM:300506"
CDS 104..337
/gene="TSC22D3"
/gene_synonym="DIP"
/gene_synonym="GILZ"
/gene_synonym="hDIP"
/gene_synonym="TSC-22R"
/codon_start=1
/product="TSC22 domain family, member 3"
/protein_id="AAH18148.3"
/db_xref="GeneID:1831"
/db_xref="HGNC:HGNC:3051"
/db_xref="MIM:300506"
/translation="MDLVKNHLMYAVREEVEILKEQIRELVEKNSQLERENTLLKTLA
SPEQLEKFQSCLSPEEPAPESPQVPEAPGGSAV"
BASE COUNT 412 a 365 c 433 g 437 t
ORIGIN
1 gaaggccgga agcttaccag ccgagaagga attcctagct agcttcagag ccggtgcctc
61 cggagccagc gtggtggcca tagacaacaa gatcgaacag gccatggatc tggtgaagaa
121 tcatctgatg tatgctgtga gagaggaggt ggagatcctg aaggagcaga tccgagagct
181 ggtggagaag aactcccagc tagagcgtga gaacaccctg ttgaagaccc tggcaagccc
241 agagcagctg gagaagttcc agtcctgtct gagccctgaa gagccagctc ccgaatcccc
301 acaagtgccc gaggcccctg gtggttctgc ggtgtaagtg gctctgtcct cagggtgggc
361 agagccacta aacttgtttt acctagttct ttccagtttg tttttggctc cccaagcatc
421 atctcacgag gagaacttta cacctagcac agctggtgcc aagagatgtc ctaaggacat
481 ggccacctgg gtccactcca gcgacagacc cctgacaaga gcaggtctct ggaggctgag
541 ttgcatgggg cctagtaaca ccaagccagt gagcctctaa tgctactgcg ccctgggggc
601 tcccagggcc tgggcaactt agctgcaact ggcaaaggag aagggtagtt tgaggtgtga
661 caccagtttg ctccagaaag tttaaggggt ctgtttctca tctccatgga catcttcaac
721 agcttcacct gacaacgact gttcctatga agaagccact tgtgttttaa gcagaggcaa
781 cctctctctt ctcctctgtt tcgtgaaggc aggggacaca gatgggagag attgagccaa
841 gtcagccttc tgttggttaa tatggtataa tgcatggctt tgtgcacagc ccagtgtggg
901 attacagctt tgggatgacc gcttacaaag ttctgtttgg ttagtattgg catagttttt
961 ctatatagcc ataaatgcgt atatataccc atagggctag atctgtatct tagtgtagcg
1021 atgtatacat atacacatcc acctacatgt tgaagggcct aaccagcctt gggagtattg
1081 actggtccct tacctcttat ggctaagtct ttgactgtgt tcatttacca agttgaccca
1141 gtttgtcttt taggttaagt aagactcgag agtaaaggca aggagggggg ccagcctctg
1201 aatgcggcca cggatgcctt gctgctgcaa ccctttcccc agctgtccac tgaaacgtga
1261 agtcctgttt tgaatgccaa acccaccatt cactggtgct gactacatag aatggggttg
1321 agagaagatc agtttgggct tcacagtgtc atttgaaaac gttttttgtt ttgttttgta
1381 attattgtgg aaaactttca agtgaacaga aggatggtgt cctactgtgg atgagggatg
1441 aacaagggga tggctttgat ccaatggagc ctgggaggtg tgcccagaaa gcttgtctgt
1501 agcgggtttt gtgagagtga acactttcca ctttttgaca ccttatcctg atgtatggtt
1561 ccaggatttg gattttgatt ttccaaatgt agcttgaaat ttcaataaac tttgctctgt
1621 ttttctaaaa ataaaaaaaa aaaaaaa
//