LOCUS BC018105 1585 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens sorting nexin 7, mRNA (cDNA clone MGC:8717 IMAGE:3849824), complete cds. ACCESSION BC018105 VERSION BC018105.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1585) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1585) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 20 Row: l Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23111054. FEATURES Location/Qualifiers source 1..1585 /db_xref="H-InvDB:HIT000038267" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:8717 IMAGE:3849824" /tissue_type="Colon, adenocarcinoma" /clone_lib="NIH_MGC_65" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1585 /gene="SNX7" /gene_synonym="DKFZP564F052" /gene_synonym="MGC8717" /db_xref="GeneID:51375" /db_xref="HGNC:HGNC:14971" CDS 183..1193 /gene="SNX7" /gene_synonym="DKFZP564F052" /gene_synonym="MGC8717" /codon_start=1 /product="sorting nexin 7" /protein_id="AAH18105.1" /db_xref="GeneID:51375" /db_xref="HGNC:HGNC:14971" /translation="MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVT TIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIV KGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPG LLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYF DEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVL YSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLCLATWESFLTSQTNLHLEEASED KP" BASE COUNT 523 a 269 c 328 g 465 t ORIGIN 1 aggtgctgga tctggacgag gacgaggacg acctggaggt gttcagcaag ggaggttgaa 61 tgtcactcca gtttctcaag ttgctgctga gagaagacct gagttcagat cacaacgctg 121 tattcattac taagaagcct gttcatttta acgttacctg gagatattag gatgcctcat 181 tgatggacat gaactccttc agccctatga tgccaacatc ccctttatca atgataaacc 241 aaatcaagtt tgaggatgaa ccagatttaa aggatctctt catcacagtt gatgaacctg 301 aaagtcatgt tactacaata gaaactttca ttacgtatag gattattact aagacatctc 361 gtggggaatt tgactccagt gaatttgaag ttaggagacg atatcaagat ttcctttggt 421 tgaagggaaa actggaagaa gcacacccca ctctgattat tccaccattg ccagaaaagt 481 ttatagtaaa aggaatggtg gaacgcttta acgatgactt cattgagaca cgcaggaagg 541 ctttacataa atttttgaac cgaattgctg atcatccaac tttaacattt aatgaagact 601 tcaaaatttt tctcactgca caagcttggg aactctcttc tcacaagaag caaggtcctg 661 gcttgctaag caggatgggg caaaccgtca gagctgttgc gtcctcaatg agaggagtta 721 aaaaccgccc agaggagttc atggaaatga ataactttat tgaactattt agccagaaaa 781 taaatttgat agataaaata tctcagagaa tttataagga agaaagggaa tattttgatg 841 aaatgaaaga atatggccca attcatattc tgtggtcagc gtcagaagag gatctggttg 901 atactctaaa ggatgttgcc agctgcattg acagatgctg taaggccact gaaaagcgga 961 tgtctggact ctcagaggcc ctgcttcctg ttgtacatga gtacgtgctt tatagtgaaa 1021 tgttaatggg tgttatgaaa agaagagacc aaatacaagc agaactggat tccaaagttg 1081 aagttttgac ctataaaaag gcagatactg atctgtgcct tgctacgtgg gaatcattcc 1141 ttacatcaca gaccaacctt cacttggaag aagcctctga agataaacct taatcccatt 1201 gaggacttct gtttgatctt tgggagacag catttattaa ccaaagttat tctttctgga 1261 tctgccgtgt ccttataaag tggatgaaaa atgttttgta cccatctgga aaaccaacaa 1321 cttgaaatct caggtattcc aggtcactga catgaatttg aagatatatc tatctgtatg 1381 gatatatatc tatatgtata tagatatata aatacagaga gatatctggc ttggttttaa 1441 ttatgttctt aaatttgtgt gccaataatt gcatatagat tttttttctt aaatatttga 1501 ctgtggaaca tgccatttta aatatgttgt aaggactgtt ttaataaaaa gtttagtatg 1561 aaaaaaaaaa aaaaaaaaaa aaaaa //