LOCUS BC018085 1218 bp mRNA linear HUM 28-SEP-2006
DEFINITION Homo sapiens chromosome 6 open reading frame 57, mRNA (cDNA clone
MGC:26946 IMAGE:4817876), complete cds.
ACCESSION BC018085
VERSION BC018085.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1218)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1218)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: o Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46275838.
FEATURES Location/Qualifiers
source 1..1218
/db_xref="H-InvDB:HIT000038259"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26946 IMAGE:4817876"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1218
/gene="C6orf57"
/db_xref="GeneID:135154"
/db_xref="HGNC:HGNC:20957"
CDS 25..351
/gene="C6orf57"
/codon_start=1
/product="chromosome 6 open reading frame 57"
/protein_id="AAH18085.1"
/db_xref="GeneID:135154"
/db_xref="HGNC:HGNC:20957"
/translation="MTPSRLPWLLSWVSATAWRAARSPLLCHSLRKTSSSQGGKSELV
KQSLKKPMLPEGRFDAPEDSHLEKEPLEKFPDDVNPVTKEKGGPRGPEPTRYGDWERK
GRCIDF"
BASE COUNT 354 a 255 c 275 g 334 t
ORIGIN
1 gcgggggctc ggggagtcgg cgccatgacc ccatcgaggc ttccctggtt gcttagctgg
61 gtctcggcca cggcgtggag agcggcaaga tcaccccttc tgtgtcattc tctgaggaaa
121 acaagttctt ctcaaggagg aaagtctgaa cttgtcaaac agtcccttaa gaagccgatg
181 ttaccagaag gtcgttttga tgcaccagag gattcccatt tagagaaaga accactggaa
241 aaatttccag atgatgttaa tccagtgacc aaagaaaaag gtggacccag gggcccagaa
301 cctacccgat atggagattg ggaacgaaaa ggacgctgta ttgattttta agtcgcatat
361 tctttaactt caatattgtt ttctgaatat gtacatctga attaacttat ttatgattat
421 tttctttctt tatatccttt atgtcgtgta gtttgtataa tgtgtttaaa tatatatata
481 tatgatggct ttggaagaaa atatgctgct gtaaattagg aaagggagac cagcctgacc
541 aatatggaga aatctcgcct ttgctgaaaa tacaaaatta gccaggcgtg gtggcatgca
601 cctgtaatcc caactactct ggaggctgag gcaggagaat ggcttgaacc caggaggtgg
661 aggttgcggt gagctgaggt cgcgccattg cactccagcc tgggcaacaa gagcgaaact
721 ccgtctcaaa aaaaaagata ggaaagggaa aatatttttt cattaacata tattaattta
781 atgagtatag aaatgattct tgtttttttg agacggagtc tctctctctc acccaggctg
841 gagtggagtg gcgctatccc agctcactgc aacttccgcc ccgccaggtt cgggcaattc
901 tcctgcctca gcctcctgag tagctgggat tacagacacc caccattgcg cctggctaat
961 ttttgtattt ttagtaaaga caaggtttca ccatgttagc caggctggtc tcgaactcct
1021 gacctcagtt gatccacctg cctcagcctc ccaaagtgct gggattgcag gtgtgagcca
1081 ccacgcccag cctagaaatg attcttagag ctgtaggcct ttacttcatc atttttcagt
1141 ttaaattaat cagttgctta taaaatgcat acataaataa aataattttt aaaaaaaaaa
1201 aagaaaaaaa aaaaaaaa
//