LOCUS BC018083 1265 bp mRNA linear HUM 01-SEP-2006 DEFINITION Homo sapiens transmembrane protein 171, mRNA (cDNA clone MGC:26940 IMAGE:4797244), complete cds. ACCESSION BC018083 VERSION BC018083.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1265) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1265) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 32 Row: f Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 42476211. FEATURES Location/Qualifiers source 1..1265 /db_xref="H-InvDB:HIT000089565" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26940 IMAGE:4797244" /tissue_type="Brain, hypothalamus" /clone_lib="NIH_MGC_96" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1265 /gene="TMEM171" /gene_synonym="PRP2" /db_xref="GeneID:134285" /db_xref="HGNC:HGNC:27031" CDS 191..1165 /gene="TMEM171" /gene_synonym="PRP2" /codon_start=1 /product="transmembrane protein 171" /protein_id="AAH18083.2" /db_xref="GeneID:134285" /db_xref="HGNC:HGNC:27031" /translation="MSPAAAAEPDGDQQDRHVSKLILCFFVFGAVLLCVGVLLSIFGF QACQYKPLPDCPMVLKVAGPACAVVGLGAVILARSRAQLQLRAGLQRGQQMDPDRAFI CGESRQFAQCLIFGFLFLTSGMLISVLGIWVPGCGSNWAQEPLNETDTGDSEPRMCGF LSLQIMGPLIVLVGLCFFVVAHVKKRNTLNAGQDASEREEGQIQIMEPVQVTVGDSVI IFPPPPPPYFPESSASAVAESPGTNSLLPNENPPSYYSIFNYGRTPTSEGAASERDCE SIYTISGTNSSSEASHTPHLPSELPPRYEEKENAAATFLPLSSEPSPP" BASE COUNT 280 a 345 c 335 g 305 t ORIGIN 1 aggacgcgcg gtgggtaggg tgcagggcgg ccggcgcagc cgaggccgcg tgcggaggcg 61 gacgccgcgc ccagccagtg cccacagcag cgcggtcagc caggcgccgg acccagcttc 121 agagctgctg aaatcttgga gggaagaaaa cacatcccac cctgcctccg ggaaggggcc 181 tctcctggac atgtctcctg cagctgctgc tgagccagat ggggaccagc aggacagaca 241 cgtcagcaaa ctcatcctct gcttctttgt cttcggcgcc gtcttgttgt gtgtgggagt 301 cctgctctcc atctttgggt tccaggcatg ccaatataag cccctcccag actgccccat 361 ggtgctcaag gtggcggggc ctgcatgtgc cgtggttggg cttggggctg tgatcctggc 421 ccgctcccgg gcgcaacttc agctccgtgc agggctgcag agaggtcagc agatggaccc 481 cgaccgagcc ttcatctgtg gagagagccg ccagtttgcc cagtgcctta tctttgggtt 541 tctgttcttg acaagcggca tgctcatcag cgtcctgggc atttgggtcc ctggatgtgg 601 ctccaactgg gcgcaggaac cgctaaacga gacagacact ggcgactcag agccccggat 661 gtgtgggttc ctttctctgc agatcatggg gcccttgatt gtgcttgtgg gattgtgttt 721 cttcgtggtt gcccatgtta agaagagaaa cacgctgaat gctggccagg atgcctctga 781 gagagaagag ggacagatcc agattatgga gcctgtccag gtcactgtag gtgactcggt 841 aataatattt ccaccccctc caccacctta ctttcctgaa tcttcagctt ctgcggtcgc 901 tgagagtcct ggaactaaca gtctgcttcc gaatgaaaac cccccttcat attacagtat 961 tttcaactat ggcaggaccc caacttcaga gggtgcagcc tctgaaagag actgtgaatc 1021 tatatatacc atttctggga cgaattcatc ttctgaggcc tcacacactc cacatcttcc 1081 atctgaattg cctcctagat atgaagaaaa agaaaatgct gcagctacat tcttgcctct 1141 atcttctgag ccttccccac cgtaaactat ggactctagt tcagttttat atgcaatgga 1201 tcactatttt atttaatttt ttttaaataa aaaatacaat agcattggcg aaaaaaaaaa 1261 aaaaa //