LOCUS BC018046 2030 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens copine VI (neuronal), mRNA (cDNA clone MGC:26354
IMAGE:4799650), complete cds.
ACCESSION BC018046
VERSION BC018046.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2030)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2030)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: h Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 12545386.
FEATURES Location/Qualifiers
source 1..2030
/db_xref="H-InvDB:HIT000038235"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26354 IMAGE:4799650"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2030
/gene="CPNE6"
/gene_synonym="N-COPINE"
/db_xref="GeneID:9362"
/db_xref="HGNC:HGNC:2319"
/db_xref="MIM:605688"
CDS 106..1779
/gene="CPNE6"
/gene_synonym="N-COPINE"
/codon_start=1
/product="copine VI (neuronal)"
/protein_id="AAH18046.1"
/db_xref="GeneID:9362"
/db_xref="HGNC:HGNC:2319"
/db_xref="MIM:605688"
/translation="MSDPEMGWVPEPQTMTLGASRVELRVSCHGLLDRDTLTKPHPCV
LLKLYSDEQWVEVERTEVLRSCSSPVFSRVLALEYFFEEKQPVQFHVFDAEDGATSPR
NDTFLGSTECTLGQIVSQTKVTKPLLLKNGKTAGKSTITIVAEEVSGTNDYVQLTFRA
YKLDNKDLFSKSDPFMEIYKTNEDQSDQLVWRTEVVKNNLNPSWEPFRLSLHSLCSCD
VHRPLKFLVYDYDSSGKHDFIGEFTSTFQEMQEGTANPGQEMQWDCINPKYRDKKKNY
KSSGTVVLAQCTVEKVHTFLDYIMGGCQISFTVAIDFTASNGDPRSSQSLHCLSPRQP
NHYLQALRAVGGICQDYDSDKRFPAFGFGARIPPNFEVSHDFAINFDPENPECEEISG
VIASYRRCLPQIQLYGPTNVAPIINRVAEPAQREQSTGQATKYSVLLVLTDGVVSDMA
ETRTAIVRASRLPMSIIIVGVGNADFSDMRLLDGDDGPLRCPRGVPAARDIVQFVPFR
DFKDAAPSALAKCVLAEVPRQVVEYYASQGISPGAPRPCTLATTPSPSP"
BASE COUNT 429 a 627 c 571 g 403 t
ORIGIN
1 agcatagccg gagctggagc cggcgccagc ggctggagca gcaagggagt cagggccagg
61 gccagagagc cggagagagg agcccccgac cgagagccca gtgacatgtc ggaccctgag
121 atgggatggg tgcctgagcc ccaaaccatg acgctggggg cctctcgggt ggagctgcgg
181 gtgtcctgcc atggcctcct ggaccgggac acactcacca aaccccaccc ctgcgtgctg
241 ctcaagctct actctgatga gcagtgggtg gaggtagagc gcacagaggt gcttcgctcc
301 tgttccagcc ctgtcttctc ccgggtgctg gcccttgagt atttttttga ggagaagcag
361 cccgtgcagt tccacgtgtt cgatgccgag gacggagcca ccagcccccg aaatgatacc
421 ttcctcggct ctacggagtg caccttgggc cagattgtgt cacaaaccaa ggtcactaag
481 ccattattgc tgaagaatgg gaagactgcg ggcaagtcca ccatcacgat cgtggccgag
541 gaggtatcag gcacaaacga ctatgtgcaa ctcaccttca gagcctacaa gctggacaac
601 aaggatctgt tcagcaagtc tgaccctttc atggaaatct ataagaccaa cgaggaccaa
661 agtgatcagc tggtctggag aactgaggtg gtgaagaaca acctgaaccc cagctgggag
721 ccgttccgcc tgtccctgca ttccctatgc agctgtgatg ttcaccgacc tctcaagttc
781 ctggtgtatg actatgactc cagtgggaag catgacttca tcggcgagtt caccagcact
841 ttccaggaga tgcaggaagg gacggcaaac cctgggcagg agatgcagtg ggactgtatc
901 aaccccaagt atcgggacaa gaagaagaat tacaagagct cagggacggt agtgctggcc
961 cagtgcacgg tggagaaggt gcacaccttc ctggattaca tcatgggtgg ctgccagatc
1021 agcttcacgg tggccattga cttcactgcc tccaatgggg acccgaggag cagccagtcc
1081 ctgcactgcc tcagtccccg acagcccaac cactacctgc aggccctgcg tgcagtggga
1141 ggcatctgcc aggactatga cagtgataag cggttcccag cttttggctt tggggctcga
1201 atccccccca acttcgaggt gtcccatgac tttgctatca actttgaccc ggaaaatcct
1261 gaatgtgaag agatctcagg ggtcatcgcc tcctaccgtc gttgcctgcc ccagatccag
1321 ctctacggcc ccaccaatgt ggcccccatc atcaaccgtg tggctgagcc ggcccagcgg
1381 gagcagagca ccggccaagc cacgaagtac tcggtgctgc tggtgctcac tgacggtgtg
1441 gtgagcgaca tggctgagac tcgcactgct atcgtgcgtg cctcccgcct gcccatgtcc
1501 atcatcatcg taggcgtggg caatgctgac ttctctgaca tgcggctgct ggatggcgac
1561 gacggcccct tgcgctgccc ccgaggggtg cctgcagccc gagacattgt ccagttcgtg
1621 cccttccgag acttcaagga tgctgccccc tctgcactcg ccaagtgtgt cctggctgag
1681 gtgccacggc aggtggtgga gtactacgcc agccagggca tcagccctgg ggctcccagg
1741 ccctgcacac tggctacgac tcccagccct agcccgtgac tgcctccctc cggaccgaca
1801 ctccctcagc ctctcagtgc ctgtcctgac cctcgtgact ccagtgacca atgcctccac
1861 ctcttggacc aggtgtgccc cctgggttct ggacgtgagt ggtgggtcct gctcctatct
1921 ctccaaaccc catacccttc aatgctgtgg cccctcagtg acttccttgg gtgatcctga
1981 ctttctagcc attaataaag agaactgctc ctaacaaaaa aaaaaaaaaa
//