LOCUS BC017941 1267 bp mRNA linear HUM 14-SEP-2006
DEFINITION Homo sapiens ChaC, cation transport regulator homolog 2 (E. coli),
mRNA (cDNA clone MGC:24036 IMAGE:4282697), complete cds.
ACCESSION BC017941
VERSION BC017941.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1267)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1267)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 35 Row: m Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56790286.
FEATURES Location/Qualifiers
source 1..1267
/db_xref="H-InvDB:HIT000038204"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24036 IMAGE:4282697"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1267
/gene="CHAC2"
/db_xref="GeneID:494143"
/db_xref="HGNC:HGNC:32363"
CDS 69..623
/gene="CHAC2"
/codon_start=1
/product="ChaC, cation transport regulator homolog 2 (E.
coli)"
/protein_id="AAH17941.1"
/db_xref="GeneID:494143"
/db_xref="HGNC:HGNC:32363"
/translation="MWVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPG
KPGRVVTLVEDPAGCVWGVAYRLPVGKEEEVKAYLDFGEKGGYRTTTVIFYPKDPTTK
PFSVLLYIGTCDNPDYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELANSIRNLVPEEA
DEHLFALEKLVKERLEGKQNLNCI"
BASE COUNT 437 a 216 c 239 g 375 t
ORIGIN
1 gcttcagtcc ccggcggcgc ggcgacagct agggttcacg gccactgggg cagaggagcc
61 gcgagaagat gtgggttttt ggttacgggt ccctgatctg gaaggtggat ttcccctatc
121 aggacaagct ggtcggatac atcaccaact acagcaggcg cttctggcag ggcagcacgg
181 accaccgcgg ggtccccggc aagcctggaa gagttgtgac tcttgttgaa gatcctgcgg
241 gatgtgtatg gggtgttgct tacagattgc cagtaggaaa ggaagaagaa gtaaaagcat
301 accttgactt cggagaaaaa ggaggctaca gaaccacaac agtcattttt tatccaaaag
361 atcccacaac aaaaccattc agtgtattgc tatatattgg aacatgtgat aatcctgatt
421 atcttggtcc tgcacctctg gaagacattg ctgaacaaat ttttaatgca gctggtccaa
481 gtggaagaaa tacagaatat ctttttgaac ttgcaaattc tattaggaac cttgtgccag
541 aagaagcaga tgagcatctt ttcgctttgg aaaaattagt aaaggaacgt ttagaaggga
601 aacagaacct caattgcata taatttagtc ttcagagaat taacttcagt gcacaatgac
661 aatatgattt ggaaatacgt ttacttaaag atcttatttt taatgtagtg aggatattat
721 ttaaactttt attttaactg gaaatgtcct gaaacacata tttaaaatat tgggatacag
781 tgaaagaaaa attcaaattt taataacata aagatttcct aactttatgt tattgaacac
841 ttactcacta gaagtgagtt ctttagaaaa atacagtgaa ggactcagtt cagtcttgtt
901 tttatcagag tgataatcat cctgtttcac atcccaatac tattttgaaa ttctaaacaa
961 ttaaaccaaa attccaataa atataaggtt atgccttcaa tatattccta tacaattctg
1021 taaccatggt ttaaaataca caagcttaaa ataacatgct tagaaataca caataatatg
1081 aacagtattt cagccttaat tgtgaatttc cttgttattc aagtattaaa tgaaatcttt
1141 tgagttttta gccaaaaatt ggcattttta aaatacgaaa atttccttgg aattataatg
1201 tactgtacct cttctttttt aaataaaggc attttaccaa aaaaaaaaaa aaaaaaaaaa
1261 aaaaaaa
//