LOCUS BC017901 1143 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens phospholipid scramblase 1, mRNA (cDNA clone
IMAGE:4253596), complete cds.
ACCESSION BC017901
VERSION BC017901.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1143)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1143)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 35 Row: g Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1143
/db_xref="H-InvDB:HIT000038188"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4253596"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_62"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1143
/gene="PLSCR1"
/gene_synonym="MMTRA1B"
/db_xref="GeneID:5359"
/db_xref="MIM:604170"
CDS 132..518
/gene="PLSCR1"
/gene_synonym="MMTRA1B"
/codon_start=1
/product="PLSCR1 protein"
/protein_id="AAH17901.1"
/db_xref="GeneID:5359"
/db_xref="MIM:604170"
/translation="MDKQNSQMNASHPETNLPVGYPPQYPPTAFQGPPGYSGYPGPQV
SYPPPPAGHSGPGPAGFPVPNQPVYNQPVYNQPVGAAGVPWMPAPQPPLNCPPGLEYL
SQVISKTQNTHKKQNCASSLLNQISK"
BASE COUNT 370 a 241 c 217 g 315 t
ORIGIN
1 gagaaggttg cgcagcagct gtgcccggca gtctagaggc gcagaagagg aagccatcgc
61 ctggccccgg ctctctggac cttgtctcgc tcgggagcgg aaacagcggc agccagagaa
121 ctgttttaat catggacaaa caaaactcac agatgaatgc ttctcacccg gaaacaaact
181 tgccagttgg gtatcctcct cagtatccac cgacagcatt ccaaggacct ccaggatata
241 gtggctaccc tgggccccag gtcagctacc cacccccacc agccggccat tcaggtcctg
301 gcccagctgg ctttcctgtc ccaaatcagc cagtgtataa tcagccagta tataatcagc
361 cagttggagc tgcaggggta ccatggatgc cagcgccaca gcctccatta aactgtccac
421 ctggattaga atatttaagt caggtaattt caaagacaca aaatactcat aaaaaacaga
481 actgtgcttc cagcttgctt aaccagatta gcaaatgaat aattcaccaa agtctgaaat
541 agcaaaactg tatttcctgc taacagatta ctctaattct tctaggtctg gttcaatttt
601 aaagcaaaat acaaatgcct tagaaaattg tattttctgt tatcttaaat acaatctatg
661 ataatggcca atagcaaaca tttaattagc actgtttcct gcctttgttg tatgcctgat
721 acatgtatta actcatttaa tccttattga aagtctgtga tgtataggtg ctacattttt
781 caaaagaaga aacagaggtc cagagaggtt atatagctca ctctggggtg agaacctaaa
841 gagtcaagac tgttttttta atcccgaaac tttggtactg agcgaagtgc tctttagtct
901 caatactgaa taattgcctt ataatttgga agaaaattta aataaagttt attgttgagt
961 ttcaataagt ggccccaaac aaggggttaa tattttatgt gtaatatgac tcaccttttt
1021 attgtaacta ataaaactgc atttttatga tgctgctttt gttctttgga agacctaatt
1081 ttataaatgc cattaataaa ggagtaaaaa gccaaaaaaa aaaaaaaaaa aaaaaaaaaa
1141 aaa
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