LOCUS BC017882 999 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 6, mRNA (cDNA clone MGC:22756 IMAGE:4278372), complete cds. ACCESSION BC017882 VERSION BC017882.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 999) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 999) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 35 Row: k Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..999 /db_xref="H-InvDB:HIT000038178" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:22756 IMAGE:4278372" /tissue_type="Brain, primitive neuroectodermal" /clone_lib="NIH_MGC_56" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..999 /gene="PSMA6" /gene_synonym="IOTA" /gene_synonym="MGC22756" /gene_synonym="MGC2333" /gene_synonym="MGC23846" /gene_synonym="p27K" /gene_synonym="PROS27" /db_xref="GeneID:5687" /db_xref="HGNC:HGNC:9535" /db_xref="MIM:602855" CDS 74..814 /gene="PSMA6" /gene_synonym="IOTA" /gene_synonym="MGC22756" /gene_synonym="MGC2333" /gene_synonym="MGC23846" /gene_synonym="p27K" /gene_synonym="PROS27" /codon_start=1 /product="proteasome (prosome, macropain) subunit, alpha type, 6" /protein_id="AAH17882.1" /db_xref="GeneID:5687" /db_xref="HGNC:HGNC:9535" /db_xref="MIM:602855" /translation="MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRG KDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWK YKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYY CGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVG VVTVENPKFRILTEAEIDAHLVALAERD" BASE COUNT 312 a 191 c 237 g 259 t ORIGIN 1 gggaggtgct tgtgtgcctg gtgcgggagc tacggggccc agggattgtg tttaaagtag 61 tgcttgtacc aacatgtccc gtggttccag cgcgggtttt gaccgccaca ttaccatttt 121 ttcacccgag ggtcggctct accaagtaga atatgctttt aaggctatta accagggtgg 181 ccttacatca gtagctgtca gagggaaaga ctgtgcagta attgtcacac agaagaaagt 241 acctgacaaa ttattggatt ccagcacagt gactcactta ttcaagataa ctgaaaacat 301 tggttgtgtg atgaccggaa tgacagctga cagcagatcc caggtacaga gggcacgcta 361 tgaggcagct aactggaaat acaagtatgg ctatgagatt cctgtggaca tgctgtgtaa 421 aagaattgcc gatatttctc aggtctacac acagaatgct gaaatgaggc ctcttggttg 481 ttgtatgatt ttaattggta tagatgaaga gcaaggccct caggtatata agtgtgatcc 541 tgcaggttac tactgtgggt ttaaagccac tgcagcggga gttaaacaaa ctgagtcaac 601 cagcttcctt gaaaaaaaag tgaagaagaa atttgattgg acatttgagc agacagtgga 661 aactgcaatt acatgcctgt ctactgttct atcaattgat ttcaaacctt cagaaataga 721 agttggagta gtgacagttg aaaatcctaa attcaggatt cttacagaag cagagattga 781 tgctcacctt gttgctctag cagagagaga ctaaacattg tcgttagttt accagatccg 841 tgatgccact tacctgtgtg tttggtaaca acaaaccaac atcatggagg tccctggatt 901 gaaaaaggag cctctcccac tcctcctacc accgaagtgg ttaggactct atataaataa 961 aaacaaggct tttgaaaaaa aaaaaaaaaa aaaaaaaaa //