LOCUS BC017862 1232 bp mRNA linear HUM 27-OCT-2006
DEFINITION Homo sapiens haptoglobin, mRNA (cDNA clone MGC:22614
IMAGE:4700637), complete cds.
ACCESSION BC017862
VERSION BC017862.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1232)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1232)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: p Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51093872.
FEATURES Location/Qualifiers
source 1..1232
/db_xref="H-InvDB:HIT000089439"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22614 IMAGE:4700637"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1232
/gene="HP"
/gene_synonym="hp2-alpha"
/db_xref="GeneID:3240"
/db_xref="HGNC:HGNC:5141"
/db_xref="MIM:140100"
CDS 350..1036
/gene="HP"
/gene_synonym="hp2-alpha"
/codon_start=1
/product="HP protein"
/protein_id="AAH17862.1"
/db_xref="GeneID:3240"
/db_xref="HGNC:HGNC:5141"
/db_xref="MIM:140100"
/translation="MVSHHNLTTGATLINEQWLLTTAKNLFLNHSENATAKDIAPTLT
LYVGKKQLVEIEKVVLHPNYSQVDIGLIKLKQKVSVNERVMPICLPSKDYAEVGRVGY
VSGWGRNANFKFTDHLKYVMLPVADQDQCIRHYEGSTVPEKKTPKSPVGVQPILNEHT
FCAGMSKYQEDTCYGDAGSAFAVHDLEEDTWYATGILSFDKSCAVAEYGVYVKVTSIQ
DWVQKTIAEN"
BASE COUNT 362 a 271 c 329 g 270 t
ORIGIN
1 gctcttccag aggcaagacc aaccaagatg agtgccctgg gagctgtcat tgccctcctg
61 ctctggggac agctttttgc agtggactca ggcaatgatg tcacggatat cgcagatgac
121 ggctgcccga agccccccga gattgcacat ggctatgtgg agcactcggt tcgctaccag
181 tgtaagaact actacaaact gcgcacagaa ggagatggag tgtacacctt aaacaatggg
241 aagcagtgga taaataaggc tgttggagat aaacttcctg aatgtgaagc agtatgtggg
301 aagcccaaga atccggcaaa cccagtgcag cggatcctgg caggctaaga tggtttccca
361 ccataatctc accacaggtg ccacgctgat caatgaacaa tggctgctga ccacggctaa
421 aaatctcttc ctgaaccatt cagaaaatgc aacagcgaaa gacattgccc ctactttaac
481 actctatgtg gggaaaaagc agcttgtaga gattgagaag gttgttctac accctaacta
541 ctcccaggta gatattgggc tcatcaaact caaacagaag gtgtctgtta atgagagagt
601 gatgcccatc tgcctacctt caaaggatta tgcagaagta gggcgtgtgg gttatgtttc
661 tggctggggg cgaaatgcca attttaaatt tactgaccat ctgaagtatg tcatgctgcc
721 tgtggctgac caagaccaat gcataaggca ttatgaaggc agcacagtcc ccgaaaagaa
781 gacaccgaag agccctgtag gggtgcagcc catactgaat gaacacacct tctgtgctgg
841 catgtctaag taccaagaag acacctgcta tggcgatgcg ggcagtgcct ttgccgttca
901 cgacctggag gaggacacct ggtatgcgac tgggatctta agctttgata agagctgtgc
961 tgtggctgag tatggtgtgt atgtgaaggt gacttccatc caggactggg ttcagaagac
1021 catagctgag aactaatgca aggctggccg gaagcccttg cctgaaagca agatttcagc
1081 ctggaagagg gcaaagtgga cgggagtgga caggagtgga tgcgataaga tgtggtttga
1141 agctgatggg tgccagccct gcattgctga gtcaatcaat aaagagcttt cttttgaccc
1201 ataaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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