LOCUS BC017845 1085 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens structural maintenance of chromosomes 2, mRNA (cDNA
clone IMAGE:4699860), partial cds.
ACCESSION BC017845
VERSION BC017845.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1085)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1085)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: p Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5453590.
FEATURES Location/Qualifiers
source 1..1085
/db_xref="H-InvDB:HIT000089425"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4699860"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_61"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>1085
/gene="SMC2"
/gene_synonym="CAP-E"
/gene_synonym="CAPE"
/gene_synonym="hCAP-E"
/db_xref="GeneID:10592"
/db_xref="HGNC:HGNC:14011"
/db_xref="MIM:605576"
CDS 219..>1085
/gene="SMC2"
/gene_synonym="CAP-E"
/gene_synonym="CAPE"
/gene_synonym="hCAP-E"
/codon_start=1
/product="SMC2 protein"
/protein_id="AAH17845.1"
/db_xref="GeneID:10592"
/db_xref="HGNC:HGNC:14011"
/db_xref="MIM:605576"
/translation="MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDS
ICFLLGISNLSQVRASNLQDLVYKNGQAGITKASVSITFDNSDEKQSPLGFEVHDEIT
VTRQVVIGGRNKYLINGVNANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPE
ILSMIEEAAGTRMYEYKKIAAQKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSYL
EYQKVMREIEHLSRLYIAYQFLLAEDTKVRSAEELKEMQDKVIKLQEELSENDKKIKA
LNHEKKKKKKKKK"
BASE COUNT 362 a 191 c 245 g 287 t
ORIGIN
1 agttccggcg cgggtgttga gagcggtgtg gtaggtgttg tagccgctat ggtgaagttc
61 gctttgtagc ggccccggct agagagttgg cctgttccct gcctttgtga cccggaggag
121 cttttggggt gcgtcaagcc cctggcctga ggcagcgaac tggtttgtgg cctgtttgat
181 tcctgtcaga ggtttgctga cccaagacag tatcgaaaat gcatattaag tcaattattc
241 tagagggatt caagtcctat gctcagagga ccgaagtcaa tggttttgac cccctcttca
301 atgctatcac tggcttaaat ggtagtggga aatccaacat attggactcc atctgctttt
361 tgctgggcat ctccaacctg tctcaggttc gggcttctaa tttacaagat ttagtttaca
421 aaaatgggca ggctggtatt accaaagcct ctgtgtcaat cacttttgat aattctgacg
481 aaaagcaaag tcctttagga tttgaggttc atgatgaaat cacagtaaca aggcaggtgg
541 ttattggtgg tagaaataaa tatttaatca atggagtcaa tgccaacaac accagagtac
601 aggatctctt ctgttctgtt ggccttaatg ttaacaaccc tcactttctc atcatgcagg
661 gccgaattac aaaagtattg aatatgaaac ctccagagat tttatccatg atagaagaag
721 cagctggaac caggatgtat gaatacaaaa aaatagctgc acagaaaact atagaaaaaa
781 aggaggctaa gctgaaagaa attaagacga tacttgaaga agagattact ccaaccattc
841 aaaaattaaa agaggaaaga tcgtcctact tggagtacca aaaagtaatg agagaaatag
901 aacatttgag tcgtttatat attgcttatc agtttttgct ggctgaagat accaaagtac
961 gctcagctga ggaattaaaa gaaatgcaag ataaagttat aaagcttcag gaagaattgt
1021 ctgagaatga taaaaaaata aaagcactta atcatgaaaa aaaaaaaaaa aaaaaaaaaa
1081 aaaaa
//