LOCUS BC017809 1088 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens zinc finger protein 107, mRNA (cDNA clone
IMAGE:4658385), partial cds.
ACCESSION BC017809
VERSION BC017809.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1088)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1088)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: i Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62243639.
FEATURES Location/Qualifiers
source 1..1088
/db_xref="H-InvDB:HIT000089408"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4658385"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_61"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>1088
/gene="ZNF107"
/gene_synonym="smap-7"
/gene_synonym="Y8"
/gene_synonym="ZFD25"
/db_xref="GeneID:51427"
/db_xref="HGNC:HGNC:12887"
/db_xref="MIM:603989"
CDS 787..>1088
/gene="ZNF107"
/gene_synonym="smap-7"
/gene_synonym="Y8"
/gene_synonym="ZFD25"
/codon_start=1
/product="ZNF107 protein"
/protein_id="AAH17809.2"
/db_xref="GeneID:51427"
/db_xref="HGNC:HGNC:12887"
/db_xref="MIM:603989"
/translation="MVAKPPVMSFHFAQDLWPEQNIKDSFQKVTLRRYGKCEYENLQL
RKGCKHVDECTGHKGGHNTVNQCLTATPSKIFQCNKYVKVFDKFSNSKKKKKKKKK"
BASE COUNT 318 a 263 c 248 g 259 t
ORIGIN
1 gcctttgtct ctggctgcag ccggagctcc tgctctcctc ctcactgctc agtgtcctct
61 gctcctagag gcccagcctc tgtgtccctg tgacctgcag atattgggag atccacagct
121 aagacgccgg gactccctgg aaacctagaa atgatggagt ctcgctctgt tgctcaggct
181 gaagggcagt ggtgcgatct cggctcactg aaacctccgc cttccgggct caagcaattc
241 tcctgcctca acctcgcaag tagctgggat tacaggcatg caccaccatg cccagactgt
301 gccataacac acatttgatg ctgaaatccg ggatagggga actcctttgg gagtcgtgtc
361 ccttaacccc ttcccccgac ttcttgaaga gacccacccg cgacctcggt acctcggacc
421 agctctgtaa aagccccgcc tctgccttcg gataggtctg gccccaccct ggagtcttgc
481 ctcacagaac tgattagaag agatcagagt tttggctggt gcctttccgg agtggttgct
541 aacaattccc gaattccaca aggagataaa tgggaaaaaa aggaaccact gacatttaaa
601 gatgtcgcca tagaattctc tctggaggag tggcaatgcc tggatactgc acagcgggat
661 ttatatagga atgtgttgtt agagaactac agaaacctgg tctttttggg tattgctgtc
721 tctaagccat atctgatcac ctgtctggag caaaaaaaag agccctggaa tataaaaaga
781 catgagatgg tagccaaacc cccagtaatg tcttttcatt ttgcccaaga cctttggcca
841 gagcagaaca taaaagattc tttccagaaa gtgacactga gaagatacgg aaaatgtgaa
901 tatgagaatt tacagttaag aaaaggctgt aaacatgtgg atgagtgtac ggggcacaaa
961 ggaggtcata atacagttaa ccaatgtttg acagctaccc caagcaaaat attccagtgt
1021 aataaatatg tgaaagtctt tgataaattt tcaaattcaa aaaaaaaaaa aaaaaaaaaa
1081 aaaaaaaa
//