LOCUS BC017789 1423 bp mRNA linear HUM 20-OCT-2005
DEFINITION Homo sapiens cysteine and histidine-rich domain (CHORD)-containing
1, mRNA (cDNA clone IMAGE:4286875), complete cds.
ACCESSION BC017789
VERSION BC017789.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1423)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1423)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 35 Row: p Column: 22
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1423
/db_xref="H-InvDB:HIT000038135"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4286875"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1423
/gene="CHORDC1"
/gene_synonym="CHP1"
/db_xref="GeneID:26973"
/db_xref="HGNC:HGNC:14525"
/db_xref="IMGT/GENE-DB:14525"
/db_xref="MIM:604353"
CDS 88..438
/gene="CHORDC1"
/gene_synonym="CHP1"
/codon_start=1
/product="CHORDC1 protein"
/protein_id="AAH17789.1"
/db_xref="GeneID:26973"
/db_xref="HGNC:HGNC:14525"
/db_xref="IMGT/GENE-DB:14525"
/db_xref="MIM:604353"
/translation="MWTKKDAGKKVVPCRHDWHQTGGEVTISVYAKNSLPELSRVEAN
STLLNVHIVFEGEKEFDQNVKLWGVIDVKRSYVTMTATKIEITMRKAEPMQWASLELP
AAKKQEKQKDATTD"
BASE COUNT 503 a 177 c 273 g 470 t
ORIGIN
1 gggatgaaat actggagctg ttgtagaaga aaaacttctg attttaatac attcttagcc
61 caagagggct gtacaaaagg gaaacacatg tggactaaaa aagatgctgg gaaaaaagtt
121 gttccatgta gacatgactg gcatcagact ggaggtgaag ttaccatttc agtatatgct
181 aaaaactcac ttccagaact tagccgagta gaagcaaata gcacattgtt aaatgtgcat
241 attgtatttg aaggagagaa ggaatttgat caaaatgtga aattatgggg tgtgattgat
301 gtaaagcgaa gttatgtaac tatgactgca acaaagattg aaatcactat gagaaaagct
361 gaaccgatgc agtgggcaag ccttgaactg cctgcagcta aaaagcagga aaaacaaaaa
421 gatgccacaa cagattgagt gggagatgga aggaaggcta ttacattatt tccgaatttt
481 taatactgtg tgaagtggtg gcttgctgct gtaatctttt gttttgttgt tgtgttactg
541 aatgtggcat ttcagggtta acattaggtt cttaaaagcc aaagtcagtt tgtctttttg
601 tgcctctcat ctttcttttg tgttatgtaa gattgattat tcatttctcc ctactggtag
661 gaaccatagt tgtgtcctat acttgaagag gctggaaagt agcccataac cataattgca
721 gtatttcttt gtatttctct gttaagcaaa gaaatattaa ggaacatttt ttttatgttt
781 ttgtattatt ccataattag taaagcaaga tgaaatgtca aattttaatc agttttttca
841 tggatttgtg ttcttacagt acttgaaaat atttaaggaa gagatgaagc tctgcagttt
901 tttctatgtg ggatgattac ttttttaagg aggattaatt ctgaggtagt atagtaacta
961 aaggggaata tatgaattgt ttaacaaatt agaatttgtt tacaactact tgaattttta
1021 aattatgtca aaacttacat tacttgccaa gcagtatgat gttataggaa acataaataa
1081 gattacagag gtatcaattt ggttaaaatt caccatttta taagactaag caataatctt
1141 aacaacctct ttcctgaata tttaaatgtg tttgtatggt gttatgacta attgttactg
1201 atttagagac taagccctct taaaaccttt agttaaatat aaaaagaaat tatatatatc
1261 ttgcctccct gatggaaaac tatataaaat tgtagactta aaaggtttgt ggaaatacat
1321 taggatatca gaaaactaaa tatatggagt tgctttatga ctattacatg ttaaataaaa
1381 atagcttaat tgtaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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