LOCUS BC017722 1769 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ephrin-A3, mRNA (cDNA clone MGC:21335 IMAGE:4397263),
complete cds.
ACCESSION BC017722
VERSION BC017722.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1769)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1769)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: d Column: 19.
FEATURES Location/Qualifiers
source 1..1769
/db_xref="H-InvDB:HIT000038102"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21335 IMAGE:4397263"
/tissue_type="Duodenum, adenocarcinoma"
/clone_lib="NIH_MGC_88"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1769
/gene="EFNA3"
/gene_synonym="EFL2"
/gene_synonym="Ehk1-L"
/gene_synonym="LERK3"
/db_xref="GeneID:1944"
/db_xref="HGNC:HGNC:3223"
/db_xref="MIM:601381"
CDS 71..787
/gene="EFNA3"
/gene_synonym="EFL2"
/gene_synonym="Ehk1-L"
/gene_synonym="LERK3"
/codon_start=1
/product="ephrin-A3"
/protein_id="AAH17722.1"
/db_xref="GeneID:1944"
/db_xref="HGNC:HGNC:3223"
/db_xref="MIM:601381"
/translation="MAAAPLLLLLLLVPVPLLPLLAQGPGGALGNRHAVYWNSSNQHL
RREGYTVQVNVNDYLDIYCPHYNSSGVGPGAGPGPGGGAEQYVLYMVSRNGYRTCNAS
QGFKRWECNRPHAPHSPIKFSEKFQRYSAFSLGYEFHAGHEYYYISTPTHNLHWKCLR
MKVFVCCASTSHSGEKPVPTLPQFTMGPNVKINVLEDFEGENPQVPKLEKSISGTSPK
REHLPLAVGIAFFLMTFLAS"
BASE COUNT 343 a 577 c 514 g 335 t
ORIGIN
1 ggagctggga agcggagaag ccgggagcgc ggggctcagt cggggggcgg cggcggcggc
61 ggctccgggg atggcggcgg ctccgctgct gctgctgctg ctgctcgtgc ccgtgccgct
121 gctgccgctg ctggcccaag ggcccggagg ggcgctggga aaccggcatg cggtgtactg
181 gaacagctcc aaccagcacc tgcggcgaga gggctacacc gtgcaggtga acgtgaacga
241 ctatctggat atttactgcc cgcactacaa cagctcgggg gtgggccccg gggcgggacc
301 ggggcccgga ggcggggcag agcagtacgt gctgtacatg gtgagccgca acggctaccg
361 cacctgcaac gccagccagg gcttcaagcg ctgggagtgc aaccggccgc acgccccgca
421 cagccccatc aagttctcgg agaagttcca gcgctacagc gccttctctc tgggctacga
481 gttccacgcc ggccacgagt actactacat ctccacgccc actcacaacc tgcactggaa
541 gtgtctgagg atgaaggtgt tcgtctgctg cgcctccaca tcgcactccg gggagaagcc
601 ggtccccact ctcccccagt tcaccatggg ccccaatgtg aagatcaacg tgctggaaga
661 ctttgaggga gagaaccctc aggtgcccaa gcttgagaag agcatcagcg ggaccagccc
721 caaacgggaa cacctgcccc tggccgtggg catcgccttc ttcctcatga cgttcttggc
781 ctcctagctc tgccccctcc cctggggggg gagagatggg gcggggcttg gaaggagcag
841 ggagcctttg gcctctccaa gggaagccta gtgggcctag acccctcctc ccatggctag
901 aagtggggcc tgcaccatac atctgtgtcc gccccctcta ccccttcccc ccacgtaggg
961 cactgtagtg gaccaagcac ggggacagcc atgggtcccg ggcggccttg tggctctggt
1021 aatgtttggt accaaacttg ggggccaaaa agggcagtgc tcaggactcc ctggcccctg
1081 gtacctttcc ctgactcctg gtgccctctc cctttgtccc cccagagaga catatgcccc
1141 cagagagagc aaatcgaagc gtgggaggca cccccattgc tctcctccag gggcagaaca
1201 tggggagggg actagatggg caaggggcag cactgcctgc tgcttccttc ccctgtttac
1261 agcaataagc acgtcctcct cccccactcc cacttccagg attgtggttt ggattgaaac
1321 caagtttaca agtagacacc cctggggggg cgggcagtgg acaaggatgg caaggggtgg
1381 gcattggggt gccaggcagg catgtacaga ctctatatct ctatatataa tgtacagaca
1441 gacagagtcc cttccctctt taaccccctg acctttcttg acttcccctt cagcttcaga
1501 ccccttcccc accaggctag gccccccaca cctgggggac cccctggccc ctcttttgtc
1561 ttctgtgaag acaggaccta tgcaacgcac agacactttt ggagaccgta aaacaacagc
1621 gccccctccc ttccagccct gagccgggaa ccatctccca ggaccttgcc ctgctcaccc
1681 tatgtggtcc cacctatcct cctgggcctt tttcaagtgc tttggctgtg actttcatac
1741 tctgctctta gtctaaaaaa aaaaaaaaa
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