LOCUS BC017701 3757 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens chromosome 4 open reading frame 18, mRNA (cDNA clone
IMAGE:4399420), complete cds.
ACCESSION BC017701
VERSION BC017701.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3757)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3757)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: e Column: 12
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..3757
/db_xref="H-InvDB:HIT000038085"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4399420"
/tissue_type="Duodenum, adenocarcinoma"
/clone_lib="NIH_MGC_88"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3757
/gene="C4orf18"
/gene_synonym="AD021"
/gene_synonym="AD036"
/gene_synonym="DKFZp434L142"
/gene_synonym="FLJ38155"
/db_xref="GeneID:51313"
/db_xref="HGNC:HGNC:25312"
CDS 175..915
/gene="C4orf18"
/gene_synonym="AD021"
/gene_synonym="AD036"
/gene_synonym="DKFZp434L142"
/gene_synonym="FLJ38155"
/codon_start=1
/product="C4orf18 protein"
/protein_id="AAH17701.1"
/db_xref="GeneID:51313"
/db_xref="HGNC:HGNC:25312"
/translation="MSEVFAFHLDRILGLNRTLPSVSRKAEFIQDGRPCPIILWDASL
SSASNDTHSSVKLTWGTYQQLLKQKCWQNGRVPKPESGCTEIHHHEWSKMALFDFLLQ
IYNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAALAHIIQRKHDPRHLVFIDNKGF
FDRSEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQSLFLDKVYWESQGGRQGIEK
LIDVIEHRAKILITYINAHGVKVLPMNE"
BASE COUNT 1135 a 678 c 662 g 1282 t
ORIGIN
1 gacccacgcg tccgcatccg aagaatgcga ctcttggcgg acagcgcagt cgcagggctc
61 cggcctgtgt cctctaggag cggagcccgt ttgctggtgc tggagggggg cgcacctggc
121 gctgtgctcc gctgtggccc tagcccctgt gggcttctca agcagccctt ggacatgagt
181 gaggtgtttg ccttccacct agacaggatc ctggggctca acaggaccct gccgtctgtg
241 agcaggaaag cagagttcat ccaagatggc cgcccatgcc ccatcattct ttgggatgca
301 tctttatctt cagcaagtaa tgacacccat tcttctgtta agctcacctg gggaacttat
361 cagcagttgc tgaaacagaa atgctggcag aatggccgag tacccaagcc tgaatcgggt
421 tgtactgaaa tacatcatca tgagtggtcc aagatggcac tctttgattt tttgttacag
481 atttataatc gcttagatac aaattgctgt ggattcagac ctcgcaagga agatgcctgt
541 gtacagaatg gattgaggcc aaaatgtgat gaccaaggtt ctgcggctct agcacacatt
601 atccagcgaa agcatgaccc aaggcatttg gtttttatag acaacaaggg tttctttgac
661 aggagtgaag ataacttaaa cttcaaattg ttagaaggca tcaaagagtt tccagcttct
721 gcagtttctg ttttgaagag ccagcactta cggcagaaac ttcttcagtc tctgtttctt
781 gataaagtgt attgggaaag tcaaggaggt agacaaggaa ttgaaaagct tatcgatgta
841 atagaacaca gagccaaaat tcttatcacc tatatcaatg cacacggggt caaagtatta
901 cctatgaatg aatgacaaaa gaatcttctg gctagggtgt tagatatatt tatgcatttt
961 tggttttgtt tttaaatcaa gcacatcaac ctcaagcccg tttagcaatg aggcagtgta
1021 gatgaatacg taaaataaat gactttaacc aagtagctat aatgggactt agcactgtat
1081 gcatacttaa aaaggttttg aaaaacaaac tacttgagaa atatttgttt atatttttct
1141 ctaacatcat gctatgtgtc agtctgaaca tctgacaaca gaaatttcag ttattattct
1201 agctaagttt tgaaaacatt tgtcatgctg tttaatagaa aactgcaaac cagagacact
1261 gactccatta ataaaccata ttttgtgccg ttttgactgt tctgaccaaa tactaatggg
1321 aacaattctt gacgtttttc tgttgctgat tgttaacata gagcagtctc tacactaccc
1381 tgaggcaact ctacattgga acactgaggc ttacagcctg caagagcatc agagctgacc
1441 atacatttaa acagaaatgc tggtttattt gcaaaatcac cagtatattt tctattgtgt
1501 ctataaaaaa tcagtcattt aagtacaaga atcatatttt ccattccttt ttagaaattt
1561 attttgttgt ccctatggaa atcattcaca tctgacaatt tatatgttaa agagttttac
1621 tctctctatt ttggtccaat ttgtatctag tggctgagaa attaaataat tctaaagtat
1681 gaagttacct atctgaaaat gtacttacag agtatcattt taaaatggat gtctctttaa
1741 aaattttgtt acttttacca acaatgtaat ataatttatg tatattttat taataatagt
1801 gaattcctta aaatttgttc tatgtactta tatttaattt gatttaatgg ttactgccca
1861 gatattgaga attggttcaa atattgagtg tgtttcaata tattatctgg cttatttcaa
1921 catgagtaat atgagcaaaa taagttaaaa cctgcgtctg atcaattttc ctcatgacta
1981 gaactaaaac agtaaatttg gacaatatta agcctcaaat aatcatctcc aaactccttc
2041 taacactttt taaatcagat tggaagacat ggacaaatca ggttcatgtg ttgcatcttt
2101 atgtcctttg ccaatatcca agatcatcac atatggtaga tattcacatg gagtttcaaa
2161 ttcagaatag attaccatta ccttcctgcc cttacacatc ctactcctta tttaaaagtt
2221 ctatttgtga cttttcattt cctgaaagtt taaaaataca atttgagaat gtttataata
2281 cattctctcc tgtcttttca cggttacgtc tgttattgct gaaatacacc acattttctt
2341 tgttctggtc aaggttaact caatatctgt gtgaaagaga actactaaca acgttacaat
2401 agaggctaga tttgaaaaaa aaaatctata gatctaattg atacaattgt agaacaaaat
2461 gtcaaaataa tgttttaagt ataagagaag atggaccaag gagagagaga tcatttgaaa
2521 atctaattgt agcttttcta ggctcacatt catgtactac ttttagcacc cttatgggct
2581 gtgctcgccc cctggacagt tgagctttgg attatcttcc tcttcaattt tccctctatt
2641 gacccgagtg tctccctctg cttctacaga tttatagtac tccttggctc ttttgagtct
2701 ccacttttac tcactgtctc tgggattttt aagatccttt tcttctctta taaatcatcc
2761 tcttaatgaa aattagccta acaaaagttt ggagactgga atcctacttt gagccactga
2821 cttgaaataa ctcttttggc aagttgcctg acatcctgtc ttaccaaggt ggcatatttg
2881 catttttact gcttaaaaca tttttttttt tttaccatct ttatccaaat ttatcatatt
2941 gatggtagga ctaacaggct ttttagaagc tggctttaac tttgagtctc aagctacaat
3001 gctgttgggc agcctggtct tcccacgtga gggtttaact ttgtttattt gcctccagtt
3061 attccaaaat gcttattaaa tgaaaggccc aggaacatgt ttattttagt cacctttgct
3121 ttttaacaat tttgttttgt aatcaatgag taattcatga tgaattattt ttgactaatg
3181 gatagccgaa ggccaggctt ttaattctaa taggtaatgt tcttcttttg tcttattgaa
3241 acaatgagaa tactctgtgc atttcaaatg cactccgatt atgctgtggt tttattcaca
3301 taagcacaat atgtgtttta tttataactt cataacaaac ttataatata ataatttacc
3361 ttagcagaca tgcaaaagct tattcttgtg tgacttactt tctttaagct aataatataa
3421 aaataaatat gtatcttaaa aatctataat aaaacattag aaattaaaga tatgtgcttt
3481 ttattttgca gatgagttca tttgcttttg tagatgtgtt ttcagagcta ggtacagagg
3541 aatgtttgct acctttagcg gtgaaaaaag aaagagagtc aagaattttg ttggattgtg
3601 tttgtgtgtg catatatttg atatcatcat tatatttgta atctttggac ttgtaatcat
3661 agcctgttta ttctactgtg ccattaaata tactttacct tatacataac gaataaaata
3721 cctagatgta gatttattta caaaaaaaaa aaaaaaa
//