LOCUS BC017666 2900 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens structural maintenance of chromosomes 5, mRNA (cDNA
clone IMAGE:3913418), partial cds.
ACCESSION BC017666
VERSION BC017666.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2900)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2900)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: k Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24850455.
FEATURES Location/Qualifiers
source 1..2900
/db_xref="H-InvDB:HIT000089355"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3913418"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>2900
/gene="SMC5"
/db_xref="GeneID:23137"
/db_xref="HGNC:HGNC:20465"
/db_xref="MIM:609386"
CDS 77..>2900
/gene="SMC5"
/codon_start=1
/product="SMC5 protein"
/protein_id="AAH17666.1"
/db_xref="GeneID:23137"
/db_xref="HGNC:HGNC:20465"
/db_xref="MIM:609386"
/translation="MATPSKKTSTPSPQPSKRALPRDPSSEVPSKRKNSAPQLPLLQS
SGPFVEGSIVRISMENFLTYDICEVSPGPHLNMIVGANGTGKSSIVCAICLGLAGKPA
FMGRADKVGFFVKRGCSRGMVEIELFRASGNLVITREIDVAKNQSFWFINKKSTTQKI
VEEKVAALNIQVGNLCQFLPQDKVGEFAKLSKIELLEATEKSIGPPEMHKYHCELKNL
REKEKQLETSCKEKTEYLQKMVQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYE
NVRQEYEEVKLVRDRVKEEVRKLKEGQIPITRRIEEMENERHNLEARIKEKATDIKEA
SQKCKQKQDVIERKDKHIEELQQALIVKQNEELDRQRRIGNTRKMIEDLQNELKTTEN
CENLQPQIDAITNDLRRIQDEKALCEGEIIDKRRERETLEKEKKSVDDHIVRFDNLMN
QKEDKLRQRFRDTYDAVLWLRNNRDKFKQRVCEPIMLTINMKDNKNAKYIENHIPSND
LRAFVFESQEDMEVFLKEVRDNKKLRVNAVIAPKSSYADKAPSRSLNELKQYGFFSYL
RELFDAPDPVMSYLCCQYHIHEVPVGTEKTRERIERVIQETRLKQIYTAEEKYVVKTS
FYSNKVISSNTSLKVAQFLTVTVDLEQRRHLEEQLKEIHRKLQAVDSGLIALRETSKH
LEHKDNELRQKKKELLERKTKKRQLEQKISSKLGSLKLMEQDTCNLEEEERKASTKIK
EINVQKAKLVTELTNLIKICTSLHIQKVDLILQNTTVISEKNKLESDYMAASSQLRLT
EQHFIELDENRQRLLQKCKELMKRARQVCNLGAEQTLPQEYQTQVPTIPNGHNSSLPM
VFQDLPNTLDEIDALLTEERSRASCFTGLNPTIVQEYTKREEEIEQLTEELKGKKVEL
DQYRENISQVKERWLNPLKELVEKKKK"
BASE COUNT 1081 a 499 c 652 g 668 t
ORIGIN
1 ggtggatggg cgcttgggcg cctgggctgc cggacggtgg gaacggaagt cgctgtggga
61 cgctgaggaa gccaggatgg cgactccgag caagaagacg tcaactccaa gcccccagcc
121 ttccaagaga gctctcccga gagacccttc gtcggaggtc ccgagcaaga ggaagaattc
181 ggccccgcag ctgccgctgt tgcagtcgtc cgggcctttc gtggaaggct ctatcgtccg
241 catctcgatg gagaacttcc taacatatga tatttgtgaa gtatctcctg gaccccactt
301 gaatatgatc gttggagcca atggaacagg gaagtcgagc attgtgtgtg ccatttgcct
361 tggtttagct ggaaaacctg ctttcatggg acgagcagat aaggttgggt tttttgtgaa
421 gagaggatgt tctagaggca tggttgaaat tgaattgttc agggcttctg gaaatcttgt
481 aatcacccgt gagattgatg tggcaaaaaa tcagtccttt tggttcatca acaaaaaatc
541 tacaacccag aaaatagtgg aagagaaagt tgcagcctta aatattcaag tggggaatct
601 ttgccagttt ctccctcagg acaaagttgg agaatttgct aaactcagca aaattgaact
661 cctcgaagcc actgaaaagt caattggtcc cccagaaatg cacaaatatc actgtgaact
721 caaaaactta agggagaaag aaaaacagct cgagacctca tgcaaagaga aaactgagta
781 tctacagaaa atggttcaga ggaatgaaag atataaacaa gatgtggaga ggttctatga
841 acggaagcga catttagatt taattgagat gcttgaagca aaaaggccat gggtggaata
901 tgaaaatgtt cgtcaggaat atgaagaagt aaaactagtt cgtgaccgag tgaaggaaga
961 ggtcagaaaa cttaaagaag ggcagattcc tataacacgt cgaattgaag aaatggaaaa
1021 cgagcgtcac aatttggagg ctcgaatcaa agaaaaggca acagatatta aggaggcatc
1081 tcaaaaatgc aaacagaagc aagatgttat agaaaggaaa gataaacata ttgaggaact
1141 tcagcaggct ttaatagtaa agcaaaatga agagcttgac cgacagagga gaataggtaa
1201 tacccgcaaa atgatagagg atttgcaaaa tgaactaaag accacggaaa actgcgagaa
1261 tcttcagccc cagattgatg ccattacaaa tgatctgaga cggattcagg atgaaaaggc
1321 attatgtgaa ggcgaaataa ttgataagcg aagagagagg gaaactctag agaaggagaa
1381 aaagagtgtg gacgatcata ttgtacgttt tgacaatctt atgaatcaga aggaagataa
1441 gctaagacag agattccgtg acacgtatga tgctgtttta tggctaagaa ataacagaga
1501 caaatttaaa caaagagtct gtgagcccat aatgctcacg atcaatatga aagataataa
1561 aaatgccaaa tatattgaaa atcatattcc atcaaatgac ttaagagcct ttgtatttga
1621 aagtcaagaa gatatggagg ttttcctcaa agaggttcgt gacaataaaa aattaagagt
1681 aaatgctgtt attgctccca agagttcata tgcagacaaa gcaccttcaa gatctttgaa
1741 tgaacttaaa caatacggat ttttctctta tttgagagaa ttatttgatg cacctgatcc
1801 tgtaatgagt tacctttgct gtcagtatca tattcatgaa gttcctgtag gaactgaaaa
1861 gaccagagaa agaattgaac gggtaataca agaaacccga ttaaaacaga tttatacagc
1921 agaagaaaag tatgtggtga aaacttcttt ttattcaaac aaagttattt ctagtaacac
1981 atctctaaaa gtagcgcagt ttctcactgt cactgtggac ctagagcaga gaagacactt
2041 agaagaacag ctaaaggaaa ttcatagaaa attgcaagca gtggattcag ggttgattgc
2101 cttacgtgaa acaagcaaac atctggagca caaagacaat gaacttagac aaaagaagaa
2161 ggagcttctt gagagaaaaa ccaagaaaag acaactggaa caaaaaatca gttccaaact
2221 aggaagttta aagctgatgg aacaggatac ttgcaatctt gaagaggaag agcgaaaagc
2281 aagtaccaaa atcaaagaaa taaatgttca aaaagcgaaa cttgttaccg aattaacaaa
2341 cctaataaag atttgtactt ctttgcatat acaaaaagta gatttaattc tccaaaatac
2401 tacagtgatc tctgagaaga acaaattaga atcagattat atggccgcat cttcacaact
2461 ccgtcttaca gagcaacatt tcattgaatt ggatgaaaat agacagagat tattgcagaa
2521 atgcaaggaa cttatgaaaa gagctaggca agtatgtaac ctgggtgcag agcagactct
2581 tcctcaagaa taccagacac aagtacccac cattccaaat ggacacaact cctcactccc
2641 catggttttc caagaccttc caaacacatt ggatgaaatt gatgctttat taactgaaga
2701 aagatcaaga gcttcctgct tcacgggact gaatcctaca attgttcagg aatatacaaa
2761 aagagaagaa gaaatagaac agttaactga ggaactaaag ggaaagaaag ttgaactaga
2821 tcaatacagg gaaaacattt cacaggtaaa agaaaggtgg cttaatcctt taaaagagct
2881 ggtagaaaaa aaaaaaaaaa
//