LOCUS BC017594 1135 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens APAF1 interacting protein, mRNA (cDNA clone MGC:714
IMAGE:2988353), complete cds.
ACCESSION BC017594
VERSION BC017594.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1135)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1135)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC017594.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: j Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7705723.
FEATURES Location/Qualifiers
source 1..1135
/db_xref="H-InvDB:HIT000038068"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:714 IMAGE:2988353"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1135
/gene="APIP"
/gene_synonym="APIP2"
/gene_synonym="CGI-29"
/gene_synonym="dJ179L10.2"
/gene_synonym="MMRP19"
/db_xref="GeneID:51074"
/db_xref="HGNC:HGNC:17581"
CDS 37..765
/gene="APIP"
/gene_synonym="APIP2"
/gene_synonym="CGI-29"
/gene_synonym="dJ179L10.2"
/gene_synonym="MMRP19"
/codon_start=1
/product="APAF1 interacting protein"
/protein_id="AAH17594.1"
/db_xref="GeneID:51074"
/db_xref="HGNC:HGNC:17581"
/translation="MSGCDAWEGDCCSRRCGAQDKEHPRYLIPELCKQFYHLGWVTGT
GGGISLKHGDEIYIAPSGVQKERIQPEDMFVYDINEKDISGPSPSKKLKKSQCTPLFM
NAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQEMIKGIKKCTSGGYYRYDDMLV
VPIIENTPEEKDLKDRMAHAMNEYPDSCAVLVRRHGVYVWGETWEKAKTMCECYDYLF
DIAVSMKKVGLDPSQLPVGENGIV"
BASE COUNT 374 a 186 c 245 g 330 t
ORIGIN
1 ggagattgga ggccgcgcgg gtccctggtc tgggccatgt ctggctgtga tgcttgggag
61 ggagactgtt gttcccggag atgcggcgcg caggacaagg agcatccaag atacctgatc
121 ccagaacttt gcaaacagtt ttaccattta ggctgggtca ctgggactgg aggaggaatt
181 agcttgaagc atggcgatga aatctacatt gctccttcag gagtgcaaaa ggaacgaatt
241 cagcctgaag acatgtttgt ttatgatata aatgaaaagg acataagtgg accttcgcca
301 tcgaagaagc taaaaaaaag ccagtgtact cctcttttca tgaatgctta cacaatgaga
361 ggagcaggtg cagtgattca tacccactct aaagctgctg tgatggccac ccttctcttt
421 ccaggacggg agtttaaaat tacacatcaa gagatgataa aaggaataaa gaaatgtact
481 tccggagggt attatagata tgatgatatg ttagtggtac ccattattga gaatacacct
541 gaggagaaag acctcaaaga tagaatggct catgcaatga atgaataccc agactcctgt
601 gcagtactgg tcagacgtca tggagtatat gtgtgggggg aaacatggga gaaggccaaa
661 accatgtgtg agtgttatga ctatttattt gatattgccg tatcaatgaa gaaagtagga
721 cttgatcctt cacagctccc agttggagaa aatggaattg tctaagccaa aagaaagtct
781 aattatatac agagataaag ctaaacgtaa ttattattta aatgaaagct atttttttaa
841 atgaattgaa atttttcatg atgctactaa tttgccacta aatactgcaa atggtcaccc
901 tgaatctctt ctgacattgg atgttatttg cttatattct tataatttta aatgagggca
961 cagtgaaatg aaaattttat actctatgtt tctgtttatt tttaaatcct taacagcaaa
1021 atatttgcct ttaatttctt ttttatatat actctcagag aattcctctt aatttttaaa
1081 gatgctggtg ataataaaat tcattagaaa atttcaaaaa aaaaaaaaaa aaaaa
//