LOCUS BC017585 1393 bp mRNA linear HUM 28-JUL-2006
DEFINITION Homo sapiens ring finger protein 113B, mRNA (cDNA clone MGC:26599
IMAGE:4828542), complete cds.
ACCESSION BC017585
VERSION BC017585.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1393)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1393)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC017585.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: e Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37059780.
FEATURES Location/Qualifiers
source 1..1393
/db_xref="H-InvDB:HIT000038061"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26599 IMAGE:4828542"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1393
/gene="RNF113B"
/gene_synonym="bA10G5.1"
/gene_synonym="MGC26599"
/gene_synonym="RNF161"
/db_xref="GeneID:140432"
/db_xref="HGNC:HGNC:17267"
CDS 32..1000
/gene="RNF113B"
/gene_synonym="bA10G5.1"
/gene_synonym="MGC26599"
/gene_synonym="RNF161"
/codon_start=1
/product="ring finger protein 113B"
/protein_id="AAH17585.1"
/db_xref="GeneID:140432"
/db_xref="HGNC:HGNC:17267"
/translation="MAAPPSPGRTADQADQVCTFLFKKPGRKGAAGLRKRPACDPEHG
ESSSSGDEGDTVAQPPRVAPRPRGLHSWQKAAHGDRRGEEAAPESLDVVYRSTRSAKP
VGPEDMGATADFEQDTEKEHHTPTILKCSQRVQEALRGREHDHIYRGIHSYLRYLKPK
DTSMGNSSSGMARKGPIRAPGHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRS
DYKLGWEIERELEEGRYCICEDENHEVGSEEEEIPFRCFICRQAFQNPVVTKCRHYFC
ESCALEHFRATPRCYICDQPTGGIFNPAKELMAKLQKLQAAEGKKR"
BASE COUNT 392 a 371 c 404 g 226 t
ORIGIN
1 ggcacggccg ttgggagcct gagactcaaa catggcagcg ccaccttctc caggaaggac
61 ggccgaccaa gcagaccagg tatgcacctt cctcttcaaa aagcctggac ggaaaggggc
121 tgcaggcctc agaaagcgcc cggcctgcga ccccgagcac ggagagagca gcagcagcgg
181 ggacgagggc gacacagtgg ctcagccccc gcgggtggca ccgaggcccc ggggcctcca
241 cagctggcag aaggcggctc acggcgacag gaggggcgag gaggcggcgc ctgagagcct
301 cgacgtggtg tacaggtcca cccgctcggc gaagcctgtg gggccggagg acatgggggc
361 caccgctgac ttcgagcagg acaccgagaa ggagcaccat acgccgacca tcctcaagtg
421 cagccagcgg gtccaggagg cactgcgggg tcgggagcac gaccacatct accggggaat
481 ccacagctac ctgaggtacc tgaagcccaa ggacacgtcc atgggcaact cctcctcggg
541 gatggcgagg aagggcccca tacgtgcgcc agggcatctg cgcgccactg tgcgctggga
601 ttaccagcct gacatctgca aggactacaa ggagactggc ttctgtggct tcggggacag
661 ctgcaaattc ctccacgacc gttccgatta caagctcggg tgggagattg aacgggagct
721 tgaagagggt cgctactgta tctgcgagga cgaaaaccat gaagtgggaa gcgaggaaga
781 ggaaatacca ttcaggtgtt tcatatgtcg ccaggccttc caaaacccag tcgtcaccaa
841 gtgcaggcat tatttctgcg agagctgcgc gctggagcac ttccgggcca ccccgcgctg
901 ctacatctgt gaccagccaa ccggcggcat ctttaacccc gccaaagaac tgatggcgaa
961 actgcaaaag cttcaggctg cagaaggaaa aaagagataa gaaagactca agtctgtatg
1021 tacactgggg agaagcagcc tgttgagtaa gatgagagag atgacagtct tcctgcaatc
1081 ccatgcctga gtatgtaacc aaaagaattg aaatccggat ctcaaagagg tatgtgcact
1141 cccatgttca ctgcagtatt atttgcaaaa gccaagaggt gtaaacaacc caagtgtcca
1201 tggatggatg aatggacaaa caaaatgcga tacacacaca caatggaatg ctattaagcc
1261 ttaacgggaa ggaaatcctc ttaaagattt aaactgatcc ttttaaggat cacatgctac
1321 aactagaatg aaccttgaag acgacactgc taagtgaaat aaactagtca caaaacgaaa
1381 aaaaaaaaaa aaa
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