LOCUS BC017559 1245 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens TBP-like 1, mRNA (cDNA clone MGC:9620 IMAGE:3911352),
complete cds.
ACCESSION BC017559
VERSION BC017559.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1245)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1245)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC017559.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: i Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51339290.
FEATURES Location/Qualifiers
source 1..1245
/db_xref="H-InvDB:HIT000038048"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9620 IMAGE:3911352"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1245
/gene="TBPL1"
/gene_synonym="MGC:8389"
/gene_synonym="MGC:9620"
/gene_synonym="STUD"
/gene_synonym="TLF"
/gene_synonym="TLP"
/gene_synonym="TRF2"
/db_xref="GeneID:9519"
/db_xref="HGNC:HGNC:11589"
/db_xref="MIM:605521"
CDS 219..779
/gene="TBPL1"
/gene_synonym="MGC:8389"
/gene_synonym="MGC:9620"
/gene_synonym="STUD"
/gene_synonym="TLF"
/gene_synonym="TLP"
/gene_synonym="TRF2"
/codon_start=1
/product="TBP-like 1"
/protein_id="AAH17559.1"
/db_xref="GeneID:9519"
/db_xref="HGNC:HGNC:11589"
/db_xref="MIM:605521"
/translation="MDADSDVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDV
GKVLMKLRKPRITATIWSSGKIICTGATSEEEAKFGARRLARSLQKLGFQVIFTDFKV
VNVLAVCNMPFEIRLPEFTKNNRPHASYEPELHPAVCYRIKSLRATLQIFSTGSITVT
GPNVKAVATAVEQIYPFVFESRKEIL"
BASE COUNT 375 a 247 c 253 g 370 t
ORIGIN
1 gacggagtcc gagcctcggg ggctcctagc aacgggccgg ggcgggagtt ccatggagac
61 tggggagcgc gcccgtctca tcctcatcct tgtcctccag cttctccttc gcatccgacg
121 caaccggcag cagcgctgcc gccgcgtcct cagccaccgc tccctcttcc cacggatgtg
181 atcttcgtgg tggaaagcta aattttaaaa ccaccccaat ggatgcagac agtgatgttg
241 cattggacat tctaattaca aatgtagtct gtgtttttag aacaagatgt catttaaact
301 taaggaagat tgctttggaa ggagcaaatg taatttataa acgtgatgtt ggaaaagtat
361 taatgaagct tagaaaacct agaattacag ctacaatttg gtcctcagga aaaattattt
421 gcactggagc aacaagtgaa gaagaagcta aatttggtgc cagacgctta gcccgtagtc
481 tgcagaaact aggttttcag gtaatattta cagattttaa ggttgttaac gttctggcag
541 tgtgtaacat gccatttgaa atccgtttgc cagaattcac aaagaacaat agacctcatg
601 ccagttacga acctgaactt catcctgctg tgtgctatcg gataaaatct ctaagagcta
661 cattacagat tttttcaaca ggaagtatca cagtaacagg gcccaatgta aaggctgttg
721 ctactgctgt ggaacagatt tacccatttg tgtttgaaag caggaaagaa attttataat
781 tcaccactta attggttaga atctctaact gagcaccttt taaacctgct gcacattgga
841 ctcaaaagga aaactggacc aacaataatt gaggaaatag actcttttat tcattcacgg
901 ctacagtgta agctccagtc cctttggatt ttattccaaa ccttgctgta atataaaagg
961 aagtttacaa gacatgatat tgctgctttt acaaaaggac attctattta ttttcgcagt
1021 aattctcatg tccccataag cagagctgtc acagtgtgca ctaccttaga ttgtttttat
1081 tgtcgtcatt gttatttttt tccattttga gctaatgtgt tttatttgtg aatagtcttt
1141 tacatttttg tatgctgaat atgggcacca aagaacctgt aaaagttatc tttttcaatt
1201 gaatgtgcac aaataaaagt ttggaaaaga aaaaaaaaaa aaaaa
//