LOCUS BC017493 3210 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nuclear receptor subfamily 2, group F, member 1, mRNA
(cDNA clone MGC:17907 IMAGE:3912075), complete cds.
ACCESSION BC017493
VERSION BC017493.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3210)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3210)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: j Column: 20.
FEATURES Location/Qualifiers
source 1..3210
/db_xref="H-InvDB:HIT000089318"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17907 IMAGE:3912075"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3210
/gene="NR2F1"
/gene_synonym="COUP-TFI"
/gene_synonym="EAR-3"
/gene_synonym="EAR3"
/gene_synonym="NR2F2"
/gene_synonym="SVP44"
/gene_synonym="TCFCOUP1"
/db_xref="GeneID:7025"
/db_xref="HGNC:HGNC:7975"
/db_xref="MIM:132890"
CDS 1688..2959
/gene="NR2F1"
/gene_synonym="COUP-TFI"
/gene_synonym="EAR-3"
/gene_synonym="EAR3"
/gene_synonym="NR2F2"
/gene_synonym="SVP44"
/gene_synonym="TCFCOUP1"
/codon_start=1
/product="nuclear receptor subfamily 2, group F, member 1"
/protein_id="AAH17493.1"
/db_xref="GeneID:7025"
/db_xref="HGNC:HGNC:7975"
/db_xref="MIM:132890"
/translation="MAMVVSSWRDPQDDVAGGNPGGPNPAAQAARGGGGGAGEQQQQA
GSGAPHTPQTPGQPGAPATPGTAGDKGQGPPGSGQSQQHIECVVCGDKSSGKHYGQFT
CEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGR
MPPTQPNPGQYALTNGDPLNGHCYLSGYISLLLRAEPYPTSRYGSQCMQPNNIMGIEN
ICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLHVAPL
LAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACG
LSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVR
LVGKTPIETLIRDMLLSGSSFNWPYMSIQCS"
BASE COUNT 580 a 1095 c 962 g 573 t
ORIGIN
1 cctctttctc ccccctctct ccctcctctc ctctctctct cctctcttct ctgaacctct
61 cttctctttc tcttttctta catattctac tagttgtttt ccccttcttc ttctcctttc
121 tctccttttt ctccctcctc cttgtctctt ttactccatt cctgcagaag agagagggct
181 aaacttaaaa aaaaaaaaaa ggaggaggag gaggaggagg cacccccttc gtattcttct
241 tatcgttatt ttatacatat atgatttttt ttggagggag ggtgttggtt gccggctgaa
301 gagcacttat ttaaaatact aaaaaaagaa catttttggg cgatctccag ggttttttta
361 actagctctg tgtgttatag cagaagaagc agaagaagga gcaagaaaga ggaaaagaag
421 aggattattt attcgaccta ctttggatgt ctctctcgct tttccttttt cctttttttg
481 gcaattattt tcttctgatt tttatttttt ctatttcgct gtgatttcgt cgccggcgtg
541 aattatcccg tatttttctc ccccttccgt cacctcccga aagaagaagg cagcgagagc
601 ccggcgccac cggcacaaca aaaagagcaa agtgtgtgat cttcctcgcc ggctgcctcc
661 cgctctccag cgctgccttc ctgaatggct ggctgcgtcc ggccctggac ctggcccccc
721 gacacccgcg cgccctgatc gccggcggca gcctcgccca gcgccctgct cggctcaccg
781 cgctccccgc actcccgagc ccggcgaggg ctcccgccgg gacagcggcg gcgccgcggg
841 cggccccggc ctccgctcgc gctccggctg cggccccgac tcctgctcgg actccggccc
901 gggtcccggc tcctccagcg gcgctcgccg cagcagctcc ggcggcagct ccagcggcgc
961 ctgcagccgc gacctcctcc tcctccgccg ccgccgccgc ctccgccctc gccggcttcc
1021 tctatgtcgg ctcagcccgc gcgctgcgcg tagcccgagc ggccggcggg cgggcgcccg
1081 gcgcgggtga gcgactgtgt gtgcgagtgt gtgtgtgcgc gggggtgcgg gcgaggcgga
1141 gggcgagtgt gtgcgcgcgc cgtggcccat gcccgccgcc cccggcgctg cgccccgcgc
1201 cgctcccggc tgccgcctgt gccatttctg attttgcaac ttggggaaga agaaaaaagc
1261 gagagaaggg agcttgctcg ccggggggtg gggagggggg aaggagagcg cggccccccc
1321 aggaacggag cgcgggggga gcgggcgagg ggagcagggg tgttgggggg ggagcctgag
1381 agcctggggg ggctgcaaaa agagagaaag aaaacagcag gaaccacaac aaaacgccag
1441 cagggcgggc gggcgcgcag cagcagcggg gcggccgagg cagtagcggc ggcagcggcg
1501 gcggcggcgg aggcagcggc cggtgtccgg ctcgggctcg gctcctgcga ccccggggcg
1561 cccggcgggc cccccgcccc ctccccctcc ccccttcccc ttccccttcc cctcccagcg
1621 cgcccgcgcg ccccgcggcc ctcggcgagc agctcggctc cccccagcgc tccccgggcc
1681 caaagatatg gcaatggtag ttagcagctg gcgagatccg caggacgacg tggccggggg
1741 caaccccggc ggccccaacc ccgcagcgca ggcggcccgc ggcggcggcg gcggcgccgg
1801 cgagcagcag cagcaggcgg gctcgggcgc gccgcacacg ccgcagaccc cgggccagcc
1861 cggagcgccc gccacccccg gcacggcggg ggacaagggc cagggcccgc ccggttcggg
1921 ccagagccag cagcacatcg agtgcgtggt gtgcggggac aagtcgagcg gcaagcacta
1981 cggccaattc acctgcgagg gctgcaaaag tttcttcaag aggagcgtcc gcaggaactt
2041 aacttacaca tgccgtgcca acaggaactg tcccatcgac cagcaccacc gcaaccagtg
2101 ccaatactgc cgcctcaaga agtgcctcaa agtgggcatg aggcgggaag cggttcagcg
2161 aggaagaatg cctccaaccc agcccaatcc aggccagtac gcactcacca acggggaccc
2221 cctcaacggc cactgctacc tgtccggcta catctcgctg ctgctgcgcg ccgagcccta
2281 ccccacgtcg cgctacggca gccagtgcat gcagcccaac aacattatgg gcatcgagaa
2341 catctgcgag ctggccgcgc gcctgctctt cagcgccgtc gagtgggccc gcaacatccc
2401 cttcttcccg gatctgcaga tcaccgacca ggtgtccctg ctacgcctca cctggagcga
2461 gctgttcgtg ctcaacgcgg cccagtgctc tatgccgctg cacgtggcgc cgttgctggc
2521 cgccgccggc ctgcatgcct cgcccatgtc tgccgaccgc gtcgtggcct tcatggacca
2581 catccgcatc ttccaggagc aggtggagaa gctcaaggcg ctacacgtcg actcagccga
2641 gtacagctgc ctcaaagcca tcgtgctgtt cacgtcagac gcctgtggcc tgtcggatgc
2701 ggcccacatc gagagcctgc aggagaagtc gcagtgcgca ctggaggagt acgtgaggag
2761 ccagtacccc aaccagccca gccgttttgg caaactgctg ctgcgactgc cctcgctgcg
2821 caccgtgtcc tcctccgtca tcgagcagct cttcttcgtc cgtttggtag gtaaaacccc
2881 catcgaaact ctcatccgcg atatgttact gtctgggagc agcttcaact ggccttacat
2941 gtccatccag tgctcctaga ccttgggcgc ttcccacctg ccccgtcccc ctagagactc
3001 agaggaccca cctgggccaa ggactccaaa gccgcgggga caccgggaag tgcagcgggc
3061 caggcaggct gggtgggagg gaggagggcc gagacaggag cagcccaccc agcagaaata
3121 caatccgagc tacaaagcat gggaaaaaga gactctttta ggatcagatc tgtgagcacg
3181 ttggcgagga aaaacaaaaa aaaaaaaaaa
//