LOCUS BC017489 2842 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tryptophanyl-tRNA synthetase, mRNA (cDNA clone
MGC:15973 IMAGE:3542671), complete cds.
ACCESSION BC017489
VERSION BC017489.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2842)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2842)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 23 Row: l Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47419915.
FEATURES Location/Qualifiers
source 1..2842
/db_xref="H-InvDB:HIT000038032"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15973 IMAGE:3542671"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2842
/gene="WARS"
/gene_synonym="GAMMA-2"
/gene_synonym="IFP53"
/db_xref="GeneID:7453"
/db_xref="HGNC:HGNC:12729"
/db_xref="MIM:191050"
CDS 258..1673
/gene="WARS"
/gene_synonym="GAMMA-2"
/gene_synonym="IFP53"
/codon_start=1
/product="tryptophanyl-tRNA synthetase"
/protein_id="AAH17489.1"
/db_xref="GeneID:7453"
/db_xref="HGNC:HGNC:12729"
/db_xref="MIM:191050"
/translation="MPNSEPASLLELFNSIATQGELVRSLKAGNASKDEIDSAVKMLV
SLKMSYKAAAGEDYKADCPPGNPAPTSNHGPDATEAEEDFVDPWTVQTSSAKGIDYDK
LIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRDMNQVLDAYENKKPFYLYT
GRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYLWKDLTLDQAYSYAVEN
AKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQKHVTFNQVKGIFGFTDSDCIG
KISFPAIQAAPSFSNSFPQIFRDRTDIQCLIPCAIDQDPYFRMTRDVAPRIGYPKPAL
LHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKTKVNKHAFSGGRDTIEEHRQFGG
NCDVDVSFMYLTFFLEDDDKLEQIRKDYTSGAMLTGELKKALIEVLQPLIAEHQARRK
EVTDEIVKEFMTPRKLSFDFQ"
BASE COUNT 820 a 695 c 665 g 662 t
ORIGIN
1 aagaaaccct tagctgaatg cagggtgggg agaacgaaag acaaaagcat cttttttcag
61 aagggaaact gaaagaaaga ggggaagagt attaaagacc attactggct gggcagggca
121 ctctcagcag ctcaactgcc cagcgtgacc agtggccacc tctgcagtgt cttccacaac
181 ctggtcttga ctcgtctgct gaacaaatcc tctgacctca ggccggctgt gaacgtagtt
241 cctgagagat agcaaacatg cccaacagtg agcccgcatc tctgctggag ctgttcaaca
301 gcatcgccac acaaggggag ctcgtaaggt ccctcaaagc gggaaatgcg tcaaaggatg
361 aaattgattc tgcagtaaag atgttggtgt cattaaaaat gagctacaaa gctgccgcgg
421 gggaggatta caaggctgac tgtcctccag ggaacccagc acctaccagt aatcatggcc
481 cagatgccac agaagctgaa gaggattttg tggacccatg gacagtacag acaagcagtg
541 caaaaggcat agactacgat aagctcattg ttcggtttgg aagtagtaaa attgacaaag
601 agctaataaa ccgaatagag agagccaccg gccaaagacc acaccacttc ctgcgcagag
661 gcatcttctt ctcacacaga gatatgaatc aggttcttga tgcctatgaa aataagaagc
721 cattttatct gtacacgggc cggggcccct cttctgaagc aatgcatgta ggtcacctca
781 ttccatttat tttcacaaag tggctccagg atgtatttaa cgtgcccttg gtcatccaga
841 tgacggatga cgagaagtat ctgtggaagg acctgaccct ggaccaggcc tatagctatg
901 ctgtggagaa tgccaaggac atcatcgcct gtggctttga catcaacaag actttcatat
961 tctctgacct ggactacatg gggatgagct caggtttcta caaaaatgtg gtgaagattc
1021 aaaagcatgt taccttcaac caagtgaaag gcattttcgg cttcactgac agcgactgca
1081 ttgggaagat cagttttcct gccatccagg ctgctccctc cttcagcaac tcattcccac
1141 agatcttccg agacaggacg gatatccagt gccttatccc atgtgccatt gaccaggatc
1201 cttactttag aatgacaagg gacgtcgccc ccaggatcgg ctatcctaaa ccagccctgc
1261 tgcactccac cttcttccca gccctgcagg gcgcccagac caaaatgagt gccagcgacc
1321 ccaactcctc catcttcctc accgacacgg ccaagcagat caaaaccaag gtcaataagc
1381 atgcgttttc tggagggaga gacaccatcg aggagcacag gcagtttggg ggcaactgtg
1441 atgtggacgt gtctttcatg tacctgacct tcttcctcga ggacgacgac aagctcgagc
1501 agatcaggaa ggattacacc agcggagcca tgctcaccgg tgagctcaag aaggcactca
1561 tagaggttct gcagcccttg atcgcagagc accaggcccg gcgcaaggag gtcacggatg
1621 agatagtgaa agagttcatg actccccgga agctgtcctt cgactttcag tagcactcgt
1681 tttacatatg cttataaaag aagtgatgta tcagtaatgt atcaataatc ccagcccagt
1741 caaagcaccg ccacctgtag gcttctgtct catggtaatt actgggcctg gcctctgtaa
1801 gcctgtgtat gttatcaata ctgtttcttc ctgtgagttc cattatttct atctcttatg
1861 ggcaaagcat tgtgggtaat tggtgctggc taacattgca tggtcggata gagaagtcca
1921 gctgtgagtc tctccccaaa gcagccccac agtggagcct ttggctggaa gtccatgggc
1981 caccctgttc ttgtccatgg aggactccga gggttccaag tatactctta agacccactc
2041 tgtttaaaaa tatatattct atgtatgcgt atatggaatt gaaatgtcat tattgtaacc
2101 tagaaagtgc tttgaaatat tgatgtgggg aggtttattg agcacaagat gtatttcagc
2161 ccatgccccc tcccaaaaag aaattgataa gtaaaagctt cgttatacat ttgactaaga
2221 aatcacccag ctttaaagct gcttttaaca atgaagattg aacagagttc agcaattttg
2281 attaaattaa gacttggggg tgaaactttc cagtttactg aactccagac catgcatgta
2341 gtccactcca gaaatcatgc tcgcttccct tggcacacca gtgttctcct gccaaatgac
2401 cctagaccct ctgtcctgca gagtcagggt ggcttttccc ctgactgtgt ccgatgccaa
2461 ggagtcctgg cctccgcaga tgcttcattt tgacccttgg ctgcagtgga agtcagcaca
2521 gagcagtgcc ctggctgtgt ccctggacgg gtggacttag ctagggagaa agtcgaggca
2581 gcagccctcg aggccctcac agatgtctag gcaggcctca tttcatcacg cagcatgtgc
2641 aggcctggaa gagcaaagcc aaatctcagg gaagtccttg gttgatgtat ctgggtctcc
2701 tctggagcac tctgccctcc tgtcacccag tagagtaaat aaacttcctt ggctcctgaa
2761 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2821 aaaaaaaaaa aaaaaaaaaa aa
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