LOCUS BC017348 2445 bp mRNA linear HUM 23-DEC-2003 DEFINITION Homo sapiens ATP-binding cassette, sub-family B (MDR/TAP), member 9, mRNA (cDNA clone MGC:29663 IMAGE:5014247), complete cds. ACCESSION BC017348 VERSION BC017348.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2445) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2445) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 19, 2003 this sequence version replaced BC017348.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 39 Row: l Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..2445 /db_xref="H-InvDB:HIT000037958" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:29663 IMAGE:5014247" /tissue_type="Brain, astrocytoma, grade IV" /clone_lib="NIH_MGC_98" /lab_host="DH10B" /note="Vector: pOTB7" gene 1..2445 /gene="ABCB9" /gene_synonym="EST122234" /gene_synonym="KIAA1520" /gene_synonym="TAPL" /db_xref="GeneID:23457" /db_xref="MIM:605453" CDS 26..1816 /gene="ABCB9" /gene_synonym="EST122234" /gene_synonym="KIAA1520" /gene_synonym="TAPL" /codon_start=1 /product="ABCB9 protein" /protein_id="AAH17348.1" /db_xref="GeneID:23457" /db_xref="MIM:605453" /translation="MRLWKAVVVTLAFMSVDICVTTAIYVFSHLDRSLLEDIRHFNIF DSVLDLWAACLYRSCLLLGATIGVAKNSALGPRRLRASWLVITLVCLFVGIYAMVKLL LFSEVRRPIRDPWFWALFVWTYISLGASFLLWWLLSTVRPGTQALEPGAATEAEGFPG SGRPPPEQASGATLQKLLSYTKPDVAFLVAASFFLIVAALGETFLPYYTGRAIDGIVI QKSMDQFSTAVVIVCLLAIGSSFAAGIRGGIFTLIFARLNIRLRNCLFRSLVSQETSF FDENRTGDLISRLTSDTTMVSDLVSQNINVFLRNTVKVTGVVVFMFSLSWQLSLVTFM GFPIIMMVSNIYGKYYKRLSKEVQNALARASNTAEETISAMKTVRSFANEEEEAEVYL RKLQQVYKLNRKEAAAYMYYVWGSGLTLLVVQVSILYYGGHLVISGQMTSGNLIAFII YEFVLGDCMESVGSVYSGLMQGVGAAEKVFEFIDRQPTMVHDGSLAPDHLEGRVDFEN VTFTYRTRPHTQVLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLEGGRVLLD GKPISAYDHKYLHRVVCARAWATLLRPFCI" misc_feature 587..1378 /gene="ABCB9" /gene_synonym="EST122234" /gene_synonym="KIAA1520" /gene_synonym="TAPL" /note="ABC_membrane; Region: ABC transporter transmembrane region. This family represents a unit of six transmembrane helices. Many members of the ABC transporter family (pfam00005) have two such regions" /db_xref="CDD:pfam00664" misc_feature 1535..1771 /gene="ABCB9" /gene_synonym="EST122234" /gene_synonym="KIAA1520" /gene_synonym="TAPL" /note="ABC_ATPase; Region: ABC (ATP-binding cassette) transporter nucleotide-binding domain" /db_xref="CDD:cd00267" BASE COUNT 512 a 727 c 694 g 512 t ORIGIN 1 cacccgccca cctccaacca gcaggatgcg gctgtggaag gcggtggtgg tgactttggc 61 cttcatgagt gtggacatct gcgtgaccac ggccatctat gtcttcagcc acctggaccg 121 cagcctcctg gaggacatcc gccacttcaa catctttgac tcggtgctgg atctctgggc 181 agcctgcctg taccgcagct gcctgctgct gggagccacc attggtgtgg ccaagaacag 241 tgcgctgggg ccccggcggc tgcgggcctc gtggctggtc atcaccctcg tgtgcctctt 301 cgtgggcatc tatgccatgg tgaagctgct gctcttctca gaggtgcgca ggcccatccg 361 ggacccctgg ttttgggccc tgttcgtgtg gacgtacatt tcactcggcg catccttcct 421 gctctggtgg ctgctgtcca ccgtgcggcc aggcacccag gccctggagc caggggcggc 481 caccgaggct gagggcttcc ctgggagcgg ccggccaccg cccgagcagg cgtctggggc 541 cacgctgcag aagctgctct cctacaccaa gcccgacgtg gccttcctcg tggccgcctc 601 cttcttcctc atcgtggcag ctctgggaga gaccttcctg ccctactaca cgggccgcgc 661 cattgatggc atcgtcatcc agaaaagcat ggatcagttc agcacggctg tcgtcatcgt 721 gtgcctgctg gccattggca gctcatttgc cgcaggtatt cggggcggca tttttaccct 781 catatttgcc agactgaaca ttcgccttcg aaactgtctc ttccgctcac tggtgtccca 841 ggagacaagc ttctttgatg agaaccgcac aggggacctc atctcccgcc tgacctcgga 901 caccaccatg gtcagcgacc tggtctccca gaacatcaat gtcttcctgc ggaacacagt 961 caaggtcacg ggcgtggtgg tcttcatgtt cagcctctca tggcagctct ccttggtcac 1021 cttcatgggc ttccccatca tcatgatggt gtccaacatc tacggcaagt actacaagag 1081 gctctccaaa gaggtccaga atgccctggc cagagcgagc aacacggcgg aggagaccat 1141 cagtgccatg aagactgtcc ggagcttcgc caatgaggag gaggaggcag aggtgtacct 1201 gcggaagctg cagcaggtgt acaagctgaa caggaaggag gcagctgcct acatgtacta 1261 cgtctggggc agcgggctca cactgctggt ggtccaggtc agcatcctct actacggggg 1321 ccaccttgtc atctcaggcc agatgaccag cggcaacctc atcgccttca tcatctacga 1381 gtttgtcctg ggagattgta tggagtccgt gggctccgtc tacagtggcc tgatgcaggg 1441 agtgggggct gctgagaagg tgttcgagtt catcgaccgg cagccgacca tggtgcacga 1501 tggcagcttg gcccccgacc acctggaggg ccgggtggac tttgagaatg tgaccttcac 1561 ctaccgcact cggccccaca cccaggtcct gcagaatgtc tccttcagcc tgtcccccgg 1621 caaggtgacg gccctggtgg ggccctcggg cagtgggaag agctcctgtg tcaacatcct 1681 ggagaacttc taccccctgg aggggggccg ggtgctgctg gacggcaagc ccatcagcgc 1741 ctacgaccac aagtacttgc accgtgtggt atgtgcacgg gcctgggcca cacttctccg 1801 ccctttctgc atctaaccgt ctttcttgtg agctgtaaca ggtgcggaag agggcactag 1861 agataaatgg acagttcaaa gaattatcac caattacaat gccctcctag agaaacagaa 1921 cattcttgtc cagacgtggt ggctcacacc tgtaatccca gcattttggg aagctgaggc 1981 tggaggatcc cttgaggcca gcctggacaa catagtgaga ctccgtctct attaaaaaag 2041 aaaaaaaggg cagatgtgat ggcccacgcc tgtaatccca gcactttggg aggccaaggc 2101 aggtggactg cttgagctca ggagttcaag accagcatgg ccaacatggc gaaaccccat 2161 ctctactaaa aatacagaaa ttggccgggt gtggtggcac atgcctgtaa tctcagctcc 2221 tcgggaggct gaggcacgag aatcacttga acccgggagg tagaggttgc agtgagccga 2281 gactgggcca ctgcactgca gcctgggcaa cagaataaga ctctgtctca tgaaaaaaaa 2341 gaaatagaac attctggcac tccagaagcc tcctaccccc cgccatgtgt cccttctctt 2401 tccccaagaa gtaatgtgtt gacttttaaa aaaaaaaaaa aaaaa //