LOCUS BC017333 1219 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger, HIT type 1, mRNA (cDNA clone MGC:29531
IMAGE:4647446), complete cds.
ACCESSION BC017333
VERSION BC017333.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1219)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1219)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC017333.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: f Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37594439.
FEATURES Location/Qualifiers
source 1..1219
/db_xref="H-InvDB:HIT000050682"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29531 IMAGE:4647446"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1219
/gene="ZNHIT1"
/gene_synonym="CG1I"
/db_xref="GeneID:10467"
/db_xref="HGNC:HGNC:21688"
CDS 493..957
/gene="ZNHIT1"
/gene_synonym="CG1I"
/codon_start=1
/product="zinc finger, HIT type 1"
/protein_id="AAH17333.1"
/db_xref="GeneID:10467"
/db_xref="HGNC:HGNC:21688"
/translation="MVEKKTSVRSQDPGQRRVLDRAARQRRINRQLEALENDNFQDDP
HAGLPQLGKRLPQFDDDADTGKKKKKTRGDHFKLRFRKNFQALLEEQNLSVAEGPNYL
TACAGPPSRPQRPFCAVCGFPSPYTCVSCGARYCTVRCLGTHQETRCLKWTV"
BASE COUNT 305 a 343 c 341 g 230 t
ORIGIN
1 ggcggcgaca gggagggagg aagcctagga gtccgccgcg ggacggaggc ctgggggaac
61 tgggagttca gctttctgca gagggccact aggaacctcg gattgcccac ggaagccagc
121 cactttcttt gacagtccag cccacctcct cttctgcccg gagaagctcc aggggctgcc
181 tttgtgatca cagcatcttc acaaggacca aaggaaaata agatttcttg taagaacacc
241 gtgaccacat ctttaaaatg acccatttcg tggctcccac aagatttaca cctccacact
301 gaggccggaa gtggttttgc ccctataaaa catggcgaaa agctttcttg tctccaagga
361 aacgccacgt aatgagtcaa agctgtggcg cacgcgcaga agtacaagct accggaagtg
421 atggcgcccc tactaaagcc ttggggttag tacgcgtgcg cagcagtttc ttccgacagt
481 tgtgttgtgc caatggtgga gaagaaaact tcggttcgct cccaggaccc cgggcagcgg
541 cgggtgctgg accgggctgc ccggcagcgt cgcatcaacc ggcagctgga ggccctggag
601 aatgacaact tccaggatga cccccacgcg ggactccctc agctcggcaa gagactgcct
661 cagtttgatg acgatgcgga cactggaaag aaaaagaaga aaacccgagg tgatcatttt
721 aaacttcgct tccgaaaaaa ctttcaggcc ctgttggagg agcagaactt gagtgtggcc
781 gagggcccta actacctgac ggcctgtgcg ggacccccat cgcggcccca gcgccccttc
841 tgtgctgtct gtggcttccc atccccctac acctgtgtca gctgcggtgc ccggtactgc
901 actgtgcgct gtctggggac ccaccaggag accaggtgtc tgaagtggac tgtgtgagcc
961 tgggcattcc cagagaggaa gggccgctgt gcactgcccg gccttcagaa agacagaatt
1021 tcatcaccca atgcaggggg agctcttcct ggaccaaggg aggagccgct cattcaccca
1081 acaaaactgt gtcttatctg ccaggaaaga ccagcctcac tcctgggaac tgtctggcag
1141 gtaggctggg ccccccagtg ctgttagaat aaaaagcctc gtgcccgaaa aaaaaaaaaa
1201 aaaaaaaaaa aaaaaaaaa
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