LOCUS BC017331 2026 bp mRNA linear HUM 27-OCT-2008
DEFINITION Homo sapiens apolipoprotein L, 1, mRNA (cDNA clone IMAGE:4661222).
ACCESSION BC017331
VERSION BC017331.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2026)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2026)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: f Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21735613.
FEATURES Location/Qualifiers
source 1..2026
/db_xref="H-InvDB:HIT000037949"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4661222"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 575 a 473 c 558 g 420 t
ORIGIN
1 ggcacgaggc tggaggtggg atccacacag ctcagaacag ctggatcttg ctcagtctct
61 gccaggggaa gattccttgg aggaggccct gcagcgacat ggagggagct gctttgctga
121 gagtctctgt cctctgcatc tggatgagtg cacttttcct tggtgtggga gtgagggcag
181 aggaagctgg agcgagggtg caacaaaacg ttccaagtgg gacagatact ggagatcctc
241 aaagtaagcc cctcggtgac tgggctgctg gcaccatgga cccagagagc agtatcttta
301 ttgaggatgc cattaagtat ttcaaggaaa aagtgagcac acagaatctg ctactcctgc
361 tgactgataa tgaggcctgg aacggattcg tggctgctgc tgaactgccc aggaatgagg
421 cagatgagct ccgtaaagct ctggacaacc ttgcaagaca aatgatcatg aaagacaaaa
481 actggcacga taaaggccag cagtacagaa actggtttct gaaagagttt cctcggttga
541 aaagtgagct tgaggataac ataagaaggc tccgtgccct tgcagatggg gttcagaagg
601 tccacaaagg caccaccatc gccaatgtgg tgtctggctc tctcagcatt tcctctggca
661 tcctgaccct cgtcggcatg ggtctggcac ccttcacaga gggaggcagc cttgtactct
721 tggaacctgg gatggagttg ggaatcacag ccgctttgac cgggattacc agcagtacca
781 tggactacgg aaagaagtgg tggacacaag cctaagccca cgacctggtc atcaaaagcc
841 ttgacaaatt gaaggaggtg agggagtttt tgggtgagaa catatccaac tttctttcct
901 tagctggcaa tacttaccaa ctcacacgag gcattgggaa ggacatccgt gccctcagac
961 gagccagagc caatcttcag tcagtaccgc atgcctcagc ctcacgcccc cgggtcactg
1021 agccaatctc agctgaaagc ggtgaacagg tggagagggt taatgaaccc agcatcctgg
1081 aaatgagcag aggagtcaag ctcacggatg tggcccctgt aagcttcttt cttgtgctgg
1141 atgtagtcta cctcgtgtac gaatcaaagc acttacatga gggggcaaag tcagagacag
1201 ctgaggagct gaagaaggtg gctcaggagc tggaggagaa gctaaacatt ctcaacaata
1261 attataagat tctgcaggcg gaccaagaac tgtgaccaca gggcagggca gccaccagga
1321 gagatatgcc tggcaggggc caggacaaaa tgcaaacttt tttttttttc cgagactcca
1381 tctcaaaaaa aaaaaaaaaa agaatatatt gacggaagaa tagagaggag gcttgaagga
1441 accagcaatg agaaggccag gaaaagaaag agctgaaaat ggagaaagcc caagagttag
1501 aacagttgga tacaggagaa gaaacagcgg ctccactaca gacccagccc caggttcaat
1561 gtcctccgaa gaatgaagtc tttccctggt gatggtcccc tgccctgtct ttccactctc
1621 ccttgtcctc ctgggggcat atctcagtca ggcagcggct tcctgatgat ggtcgttggg
1681 gtggttgtca tgtgatgggt cccctccagg ttactaaagg gtgcatgtcc cctgcttgaa
1741 cactgaaggg caggtggtgg gccatggcca tggtccccag ctgaggagca ggtgtccctg
1801 agaacccaaa cttcccagag agtatgtgag aaccaaccaa tgaaaacagt cccatcgctc
1861 ttacccggta agtaaacagt cagaaaatta gcatgaaagc agtttagcat tgggaggaag
1921 ctcagatctc tagagctgtc ttgtcgccgc ccaggattga cctgtgtgta agtcccaata
1981 aactcaccta ctcatcaagc tggaaaaaaa aaaaaaaaaa aaaaaa
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