LOCUS BC017303 1492 bp mRNA linear HUM 23-DEC-2003
DEFINITION Homo sapiens villin 1, mRNA (cDNA clone MGC:29534 IMAGE:5087169),
complete cds.
ACCESSION BC017303
VERSION BC017303.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1492)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1492)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC017303.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CGAP (Stanford)
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: o Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6005943.
FEATURES Location/Qualifiers
source 1..1492
/db_xref="H-InvDB:HIT000037931"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29534 IMAGE:5087169"
/tissue_type="Liver, hepatocellular carcinoma"
/clone_lib="NIH_MGC_100"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..1492
/gene="VIL1"
/gene_synonym="D2S1471"
/gene_synonym="VIL"
/db_xref="GeneID:7429"
/db_xref="MIM:193040"
CDS 21..1286
/gene="VIL1"
/gene_synonym="D2S1471"
/gene_synonym="VIL"
/codon_start=1
/product="VIL1 protein"
/protein_id="AAH17303.1"
/db_xref="GeneID:7429"
/db_xref="MIM:193040"
/translation="MTKLSAQVKGSLNITTPGLQIWRIEAMQMVPVPSSTFGSFFDGD
CYIILAIHKTASSLSYDIHYWIGQDSSLDEQGAAAIYTTQMDDFLKGRAVQHREVQGN
ESEAFRGYFKQGLVIRKGGVASGMKHVETNSYDVQRLLHVKGKRNVVAGEVEMSWKSF
NRGDVFLLDLGKLIIQWNGPESTRMERLRGMTLAKEIRDQERGGRTYVGVVDGENELA
SPKLMEVMNHVLGKRRELKAAVPDTVVEPALKAALKLYHVSDSEGNLVVREVATRPLT
QDLLSHEDCYILDQGGLKIYVWKGKKANEQEKKGAMSHALNFIKAKQYPPSTQVEVQN
DGAESAVFQQLFQKWTASNRTSGLGKTHTVGSVGEGQAGAVREPGSRSWARRATWSTT
HPPSLTCIFNEDFYAGSGLVLADGDVDKL"
misc_feature 69..356
/gene="VIL1"
/gene_synonym="D2S1471"
/gene_synonym="VIL"
/note="GEL; Region: Gelsolin homology domain"
/db_xref="CDD:smart00262"
misc_feature 432..668
/gene="VIL1"
/gene_synonym="D2S1471"
/gene_synonym="VIL"
/note="GEL; Region: Gelsolin homology domain"
/db_xref="CDD:smart00262"
misc_feature 777..1067
/gene="VIL1"
/gene_synonym="D2S1471"
/gene_synonym="VIL"
/note="GEL; Region: Gelsolin homology domain"
/db_xref="CDD:smart00262"
BASE COUNT 392 a 376 c 463 g 261 t
ORIGIN
1 ccaagacagg ctcactcacc atgaccaagc tgagcgccca agtcaaaggc tctctcaaca
61 tcaccacccc ggggctgcag atatggagga tcgaggccat gcagatggtg cctgttcctt
121 ccagcacctt tggaagcttc ttcgatggtg actgctacat catcctggct atccacaaga
181 cagccagcag cctgtcctat gacatccact actggattgg ccaggactca tccctggatg
241 agcagggggc agctgccatc tacaccacac agatggatga cttcctgaag ggccgggctg
301 tgcagcaccg cgaggtccag ggcaacgaga gcgaggcctt ccgaggctac ttcaagcaag
361 gccttgtgat ccggaaaggg ggcgtggctt ctggcatgaa gcatgtggag accaactcct
421 atgacgtcca gaggctgctg catgtcaagg gcaagaggaa cgtggtagct ggagaggtag
481 agatgtcctg gaagagtttc aaccgagggg atgttttcct cctggacctt gggaagctta
541 tcatccagtg gaatggaccg gaaagcaccc gtatggagag actcaggggc atgactctgg
601 ccaaggagat ccgagaccag gagcggggag ggcgcaccta tgtaggcgtg gtggacggag
661 agaatgaatt ggcatccccg aagctgatgg aggtgatgaa ccacgtgctg ggcaagcgca
721 gggagctgaa ggcggccgtg cccgacacgg tggtggagcc ggcactcaag gctgcactca
781 aactgtacca tgtgtctgac tccgagggga atctggtggt gagggaagtc gccacacggc
841 cactgacaca ggacctgctc agtcacgagg actgttacat cctggaccag gggggcctga
901 agatctacgt gtggaaaggg aagaaagcca atgagcagga gaagaaggga gccatgagcc
961 atgcgctgaa cttcatcaaa gccaagcagt acccaccaag cacacaggtg gaggtgcaga
1021 atgatggggc tgagtcggcc gtctttcagc agctcttcca gaagtggaca gcgtccaacc
1081 ggacctcagg cctaggcaaa acccacactg tgggctccgt gggtgagggc caggcggggg
1141 cagtgaggga gccaggatcc aggagctggg ccaggagagc cacttggtcc accacccacc
1201 ctccttccct gacgtgcatc ttcaacgaag acttttacgc tggctctggg cttgtcctag
1261 cagatgggga cgtggacaaa ctctagttgt cacaaaaagg gagctgagag ggctgggcat
1321 ggtggcacat gcctgtaatc ccagcacttt gggaggctga ggcgggtgga tcacctgagg
1381 tcaggagttt gagattagcc taacatggtg aaaccccgtc tctactgaaa aaaagaacta
1441 ataaattagc caagcatggt aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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