LOCUS BC017226 1895 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ring finger protein 166, mRNA (cDNA clone MGC:14381
IMAGE:4299817), complete cds.
ACCESSION BC017226
VERSION BC017226.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1895)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1895)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: m Column: 6.
FEATURES Location/Qualifiers
source 1..1895
/db_xref="H-InvDB:HIT000037889"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14381 IMAGE:4299817"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1895
/gene="RNF166"
/gene_synonym="MGC14381"
/gene_synonym="MGC2647"
/db_xref="GeneID:115992"
/db_xref="HGNC:HGNC:28856"
CDS 75..788
/gene="RNF166"
/gene_synonym="MGC14381"
/gene_synonym="MGC2647"
/codon_start=1
/product="ring finger protein 166"
/protein_id="AAH17226.1"
/db_xref="GeneID:115992"
/db_xref="HGNC:HGNC:28856"
/translation="MAMFRSLVASAQQRQPPAGPAGGDSGLEAQYTCPICLEVYHRPV
AIGSCGHTFCGECLQPCLQVPSPLCPLCRLPFDPKKVDKATHVEKQLSSYKAPCRGCN
KKVTLAKMRVHISSCLKVQEQMANCPKFVPVVPTSQPIPSNIPNRSTFACPYCGARNL
DQQELVKHCVESHRSDPNRVVCPICSAMPWGDPSYKSANFLQHLLHRHKFSYDTFVDY
SIDEEAAFQAALALSLSEN"
BASE COUNT 394 a 582 c 563 g 356 t
ORIGIN
1 ggcacagggc tgtgactagc gggccggccc gggccaggac agcgggcggc gggcggcgcg
61 ggcctggccc cgggatggct atgttccgca gcctggtggc ctcggctcag cagcggcagc
121 cgccggccgg gccggcgggc ggcgacagcg gcctggaggc gcagtacacc tgccccatct
181 gcctggaggt ctatcaccgg cccgtggcca tcggcagctg cggccacacg ttctgcgggg
241 agtgtctcca gccctgcctg caggtgccat ccccgctgtg cccactgtgc cgcctgccct
301 tcgaccccaa gaaggtggac aaggccaccc acgtggagaa gcagctctca tcctacaaag
361 cgccctgtcg aggctgcaac aaaaaggtga ccctggcaaa gatgagagtg cacatttcgt
421 cctgcctgaa ggtccaggag cagatggcca actgccccaa gttcgtcccc gtggtgccca
481 catcacagcc tatccccagc aacatcccca acaggtccac cttcgcctgc ccgtactgtg
541 gtgcccgcaa cctggaccag caggagctgg tgaagcactg tgtggaaagc caccgcagcg
601 accccaaccg cgtggtgtgc cccatctgct cggcaatgcc ctggggggac cccagctaca
661 agagcgccaa cttcctgcag cacctgcttc accgacacaa gttctcctac gacacctttg
721 tggactacag tattgacgag gaggccgcct tccaggctgc tctggccctg tctctctctg
781 agaactgaag ggaagcgcag ccacccgcct gcgtctgggg tcagggatgt ccccgctcct
841 gtgtcgcacc tggcacctgc tcgggagcgc acctcaccgg actgagctca caggaggagc
901 ctgcacccgc gcagaagggg agccggggcc gagcctccgg gcctgaatac gggccagccg
961 ccgaggccgc cagagcaggg ccgcctggtc ccaccggcgt cgctgggttc ttcggtgctt
1021 ctggccgagc aggcggccta cttgggcagg gctggacgct gggacctgga gctgccgccg
1081 tctcttcaaa gccatgatac cccctcgtgg gaagaaggga ccgacgcgcg agtcgcgctc
1141 cgcagtcgag ccgggaggaa cccaggctgc tgccctgccc agcccgaccc tgccccggcc
1201 ccgcttccac cttgcgcatt tggtactggc ttttgtgata cttaggaacc ctggcatctt
1261 ttctatatta tccagtgtga taatcttttc acgttttata gagcaaagac agagcagtta
1321 ctcttcatat tgcaatatct gtgtttgact aggaataata gtatttttat ggaacattta
1381 caaaattata ttttttaaga aaacaatcaa aacaagcatt gggggattgg ggcaaggatg
1441 gaaggagcag tggggcagct gccagagctc aggcgagcca tggggtctgc tgtggggtct
1501 gccctggcca cccactgtgt gtctgggtcc ttgaggtttg tacgtttctc tttgatgacc
1561 aggaagaaat cccagcaccc cagccacagg ctgtggctgc tcccagcaga ggtggggccg
1621 gcagagaagg ggcctcctcc acccagagtc ctggccttgg cccgctgtca ccttcaaagc
1681 tgactgtgcc ccgctgcggg aggggacggc accccagtgg tggcagagct tgggggcctg
1741 ggcaggggcc cgcttggcgg gccgggcaac acgtcaacat tcttttctgt tcttggcatt
1801 aattattgct gtcttttttt aaaaaaaaaa agtttaaata aaatgtctca gagcaaaaaa
1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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