LOCUS BC017120 4772 bp mRNA linear HTC 18-MAR-2009
DEFINITION Homo sapiens ArfGAP with coiled-coil, ankyrin repeat and PH domains
2, mRNA (cDNA clone IMAGE:3919558), with apparent retained intron.
ACCESSION BC017120
VERSION BC017120.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4772)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4772)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: l Column: 22
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..4772
/db_xref="H-InvDB:HIT000089197"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3919558"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 1509 a 769 c 812 g 1682 t
ORIGIN
1 caagaatgaa tgaagagatg cgggaatcag aaggacttta tggacatcca ggtgatgaaa
61 cttatcagga catatttcgt gatttttccc aaatggcatc caataatcca gagaaactaa
121 atcgtttcca gcaagattca cagaaattct gaattttttt aaaaatggga aaatatgaaa
181 tctggtgacc ccctaatgta tacagctaaa aaatcacaat ttttttactg ctttaattct
241 acttaatttt ggtagatatt gaatggcttg gaaaagaggt acccattcat atatttataa
301 attaaaacat agttatctag tagtaggaga ggaacctagt ttaggacctc ttttattaaa
361 aaagcctatt taaagggcta tttctgtaga cagaagttca gtctagattt aggccatctc
421 taggttacaa gatgatagga ggttagacaa aagtgattct tttgccaatg ggtggtggca
481 ttgatttttt tcctccatgc atcttgccca ggatcactca gtcaagcatg tcttcatcaa
541 gtggaagcca actgtcctgc ctgcctcaag aatatgtgtt ttctttagct tccctgaggc
601 tttttggtgg ttcagaaata ggtgtgtgtg ttgatgtgtt tttggtaacc tagctttcat
661 acacataata tatgatttat tagaactaga gaatgtgttt tccccgtttg ttcataaatg
721 cggtcggtta tacttcttag gtgacaggtt attgtccagt actttaatgt atgtatgtat
781 aatggctgta caggtagacc ataattcagt cctttagatt tattttatgc agcaaaaaga
841 agctcttttt tttttttaat cacaaaaaaa aaaccccagt tcaaaatgtg tagttcttca
901 ttgttgggtt gattccccaa aaccttgaca gatgtatcga tggaataaaa gtatgtttta
961 aaggttactt gaatgtcaca aaattatgcc ttcatcaaaa ctttaaagga aaaatcaatt
1021 tataaaatca tgtaggccat ttttatattt gaaatttgtc cttttaaaga tagttttgct
1081 gttgctccta gtgaaagaaa aatctctgta caaaggagaa aaagaacccc acttattctt
1141 agttaatact aaaatatata gcaataaatt gctgtttatt ttttctacat ctattttgtg
1201 tacttgtaca cagtgtacat tcttttaaat tatatcgtgt atatagcttt agtattcggt
1261 tacatgattc acagacccct gaattccaaa atattatgga taaacattac catttatatg
1321 ctacaaatta gtctgattcc atctttgaaa atgtcttaaa gtataaaata attaatttgc
1381 tttttttttt tttttcccga gatggcgtct tgctgtgtca cccaggctgg agtgcagtgg
1441 cacgatctca gctcactgca gcctcctcct cttgggttca agcaattctc ctgcctcagc
1501 ctcccgagta gctgggacta caggcacccg ccaccattcc gagctaattt ctatattttt
1561 agtaaagacg ggtttcacca ttttggccag gttggtctcg aactcctgac ctcaggtgat
1621 cagcctgctt tagcctccca gagtgctggg attacaggcg tgagccaccg cacccagcct
1681 aatttgcctt ttgattcctt cccattgttg tcaacaatta agtctattct tcttttagaa
1741 attatatgta aatgatatta ttgatactct ttctaaataa gaggttttaa aatatataaa
1801 aactttatga tccaattata gataaatttt ctaacatttc ccagtcacta gggttttata
1861 agttgattaa acatcaaatc agaatctagc caagcaggaa ttatattgaa ataagttcac
1921 attacagaaa aggttccata atttggccaa actgcatgca tgtaatgctt atttagtaat
1981 ggtcactgta tgttagataa ggataaaaat atatttgtga attacttctg aggaaatgct
2041 aacttccaca gcattgtatt taattataac aataacagga acattaaatc tttatctttg
2101 ctgtttcacc tcaaagtcat agatcatctg gctttttagg caccttcact aaaggcaaaa
2161 atctgatttg tagtttttat tagcatgtac cttgaaatta tttgaccaag aagctcaaag
2221 aaaagaagta cgttaaagaa aaagaaaaaa cctcactttt cctttatagt gtcccttcct
2281 gttttaattc ctaaagatcc tgacttttat ctgaggaagt ctaggtagtt ttccttttgg
2341 atctggccat tggtgcgtgt ttcattcaga tcacctctgg aatctctgtg gttgtgaagg
2401 caattcctta tgagactctt gcctcctgtg gcttacgtga tgaattgtta atatggcagt
2461 aattaattag tatctactta aatttagtgg tcagaaatgt atttgaagtg ccttaaagat
2521 gatcatggtt cagaatatct tcagagaaag caaaatcttt aatattgcag ggagcctagc
2581 aatacaagta cacatttctg tggcttgatt tcttgaatat gctgagaccc aatttggact
2641 acatttggca gaaatgatgg agtaaacagc aaggctttaa attaaattaa tagttacaag
2701 gtaggttggc tcttaggtga atttagccat gtcaactaat agcttttata tggtatgtaa
2761 caaatctgaa ttatgttatg ctgtgaatta ttcagtgcat tataagaaat cttagttaat
2821 catgcttttg ggcttcatta gtcaatgtga ttggcctttt attttctttc cataacttat
2881 ctgctattat tagtttctta ttccttatta ttaatctgtt agctcattat cattagctta
2941 ctaacttgaa agttagatta atatcaaaat aagaatagca gcactatgaa gagttaataa
3001 aatgcaattt catgttagag ctagaataaa agtaattgag cagtcatttg caaatgcttc
3061 attataacat ttatgtgctt aagatttcta aggttttaaa aagttacctt taatacaatc
3121 cttagaaact cagaaatttc ctgatattca ttagattatg gtgtttgcct aatttatacc
3181 ggttttcact gtatatttta atgaactttg attggttact tttccagaca tacagattta
3241 atttggaata tgaactttgg ttcttcatga gtgcattttg aaaaagaaaa aaagtacaca
3301 ttcagaatct ggccaattta agtttgtatt ttaaaaatat tttatgcatg ttaagtatgg
3361 tcgcagtaaa tgaaattgtg tttaagacta aatttactac cgttttgaac agacattccc
3421 agatcattct tatattgtca gataacactt gtgtataata tcactttgga tcatggacat
3481 gagctggaaa aatgatgtat ttttgtagat tgtatgtcca gaatgacttt agaaccgcat
3541 gatacggtgg aaggagcact ggactagtcg tcactaccct ttttggattc agggctcctc
3601 acaattaaaa tgagtgtaat gaaacaaggt gaaaatatag aagcatccct ttgtatactg
3661 ttttgctact tacagtgtac ttggcattgc tttatctcac tggattctca tggtaggatt
3721 tctgagatct taatctaagc tccaaagttg tctacttttt tgatcctagg gtgctccttt
3781 tgttttacag agcagggtca cttgatttgc tagctggtgg cagaattggc accattaccc
3841 aggtctgact gaccaccagt cagaggcact ttatttgtat catgaaatga tttgaaatca
3901 ttgtaaagca gcgaagtctg ataatgaatg ccagctttcc ttgtgctttg ataacaaaga
3961 ctccaaatat tctggagaac ctggataaaa gtttgaaggg ctagattggg atttgaagac
4021 aaaattgtag gaaatcttac atttttgcaa taacaaacat taatgaaagc aaaacattat
4081 aaaagtaatt ttaattcacc acatacttat caatttcttg atgcttccaa atgacatcta
4141 cagatatggt tttgtggaca tctttttctg tttacataaa tttatccact taaaatgtga
4201 taatgtggag acaaagcaag atttgattac ataaactttt ctctgcattg gtcttttcac
4261 tatcttattt gctaactttt cttatttttc ttcaacctcc ccaccctcca ttttttggat
4321 attaaacagg gaaagcttgc tacattataa agattgttgg caccatttat tttacacaaa
4381 ggctaaaggt taacttttgg aaatgatgag ctacttttat atatgtgttt actcatgctt
4441 tgtgatattt ctggatcatt ccagtcataa agacttatta catgtactat ttcttgctac
4501 ctgtgaaaag gtatatttta aagaatgtat aaccaacagt ccatttactt tttattagta
4561 tgtagaggat ttgtatctaa ttcatgaatg tagttttaca gtagtttgtc attgtaaatg
4621 gagcaaagta cattatcttc taaaatgtac attatgtaag aattgtaaat atacttaagt
4681 aatttgtatg ccaaaaaatt acaataagtc aataaagatc tcacctctgg caaaaaaaaa
4741 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//