LOCUS BC017089 1180 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens regenerating islet-derived family, member 4, mRNA
(cDNA clone MGC:9714 IMAGE:3850358), complete cds.
ACCESSION BC017089
VERSION BC017089.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1180)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1180)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC017089.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: l Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 36054181.
FEATURES Location/Qualifiers
source 1..1180
/db_xref="H-InvDB:HIT000037830"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9714 IMAGE:3850358"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1180
/gene="REG4"
/gene_synonym="GISP"
/gene_synonym="REG-IV"
/gene_synonym="RELP"
/db_xref="GeneID:83998"
/db_xref="HGNC:HGNC:22977"
/db_xref="MIM:609846"
CDS 139..615
/gene="REG4"
/gene_synonym="GISP"
/gene_synonym="REG-IV"
/gene_synonym="RELP"
/codon_start=1
/product="regenerating islet-derived family, member 4"
/protein_id="AAH17089.1"
/db_xref="GeneID:83998"
/db_xref="HGNC:HGNC:22977"
/db_xref="MIM:609846"
/translation="MASRSMRLLLLLSCLAKTGVLGDIIMRPSCAPGWFYHKSNCYGY
FRKLRNWSDAELECQSYGNGAHLASILSLKEASTIAEYISGYQRSQPIWIGLHDPQKR
QQWQWIDGAMYLYRSWSGKSMGGNKHCAEMSSNNNFLTWSSNECNKRQHFLCKYRP"
BASE COUNT 329 a 297 c 272 g 282 t
ORIGIN
1 cactgaagaa ggcaggggcc cttagagtct tggttgccaa acagatttgc agatcaagga
61 gaacccagga gtttcaaaga agcgctagta aggtctctga gatccttgca ctagctacat
121 cctcagggta ggaggaagat ggcttccaga agcatgcggc tgctcctatt gctgagctgc
181 ctggccaaaa caggagtcct gggtgatatc atcatgagac ccagctgtgc tcctggatgg
241 ttttaccaca agtccaattg ctatggttac ttcaggaagc tgaggaactg gtctgatgcc
301 gagctcgagt gtcagtctta cggaaacgga gcccacctgg catctatcct gagtttaaag
361 gaagccagca ccatagcaga gtacataagt ggctatcaga gaagccagcc gatatggatt
421 ggcctgcacg acccacagaa gaggcagcag tggcagtgga ttgatggggc catgtatctg
481 tacagatcct ggtctggcaa gtccatgggt gggaacaagc actgtgctga gatgagctcc
541 aataacaact ttttaacttg gagcagcaac gaatgcaaca agcgccaaca cttcctgtgc
601 aagtaccgac catagagcaa gaatcaagat tctgctaact cctgcacagc cccgtcctct
661 tcctttctgc tagcctggct aaatctgctc attatttcag aggggaaacc tagcaaacta
721 agagtgataa gggccctact acactggctt ttttaggctt agagacagaa actttagcat
781 tggcccagta gtggcttcta gctctaaatg tttgccccgc catccctttc cacagtatcc
841 ttcttccctc ctcccctgtc tctggctgtc tcgagcagtc tagaagagtg catctccagc
901 ctatgaaaca gctgggtctt tggccataag aagtaaagat ttgaagacag aaggaagaaa
961 ctcaggagta agcttctagc ccccttcagc ttctacaccc ttctgccctc tctccattgc
1021 ctgcacccca ccccagccac tcaactcctg cttgtttttc ctttggccat gggaaggttt
1081 accagtagaa tccttgctag gttgatgtgg gccatacatt cctttaataa accattgtgt
1141 acataaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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