LOCUS BC017043 1826 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens autocrine motility factor receptor, mRNA (cDNA clone
IMAGE:3904362), partial cds.
ACCESSION BC017043
VERSION BC017043.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1826)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1826)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: h Column: 7.
FEATURES Location/Qualifiers
source 1..1826
/db_xref="H-InvDB:HIT000089169"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3904362"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1826
/gene="AMFR"
/gene_synonym="GP78"
/gene_synonym="RNF45"
/db_xref="GeneID:267"
/db_xref="HGNC:HGNC:463"
/db_xref="MIM:603243"
CDS <1..880
/gene="AMFR"
/gene_synonym="GP78"
/gene_synonym="RNF45"
/codon_start=2
/product="AMFR protein"
/protein_id="AAH17043.1"
/db_xref="GeneID:267"
/db_xref="HGNC:HGNC:463"
/db_xref="MIM:603243"
/translation="RKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNRVREEHQ
GENLDENLVPVAAAEGRPRLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNILGITQAS
NSQLNAMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTDNILEGRIQVPFPTQRSDSIR
PALNSPVERPSSDQEEGETSAQTERVPLDLSPRLEETLDFGEVEVEPSEVEDFEARGS
RFSKSADERQRMLVQRKDELLQQARKRFLNKSSEDDAASESFLPSEGASSDPVTLRRR
MLAAAAERRLQKQQTS"
BASE COUNT 437 a 468 c 482 g 439 t
ORIGIN
1 gcggaaactg ccctgtggac atcttttcca caactcctgt cttcgttcct ggctagaaca
61 agacacctcc tgtccaacat gcagaatgtc tcttaatatt gccgacaata atcgtgtcag
121 ggaagaacat caaggagaga acttggatga gaatttggtt cctgtagcag cagccgaagg
181 gagacctcgc ttaaaccaac acaatcactt cttccatttc gatgggtctc ggattgcgag
241 ctggctgccg agtttttcgg ttgaagtgat gcacaccacc aacattcttg gcattacgca
301 ggccagcaac tcccagctca atgcaatggc tcatcagatt caagagatgt ttccccaggt
361 tccataccat ctggtactgc aggacctcca gctgacacgc tcagttgaaa taacaacaga
421 caatatttta gaaggacgga ttcaagtacc ttttcctaca cagcggtcag atagcatcag
481 acctgcattg aacagtcctg tggaaaggcc aagcagtgac caggaagagg gagaaacttc
541 tgctcagacc gagcgtgtgc cactggacct cagtcctcgc ctggaggaga cgctggactt
601 cggcgaggtg gaagtggagc ccagtgaggt ggaagacttc gaggctcgtg ggagccgctt
661 ctccaagtct gctgatgaga gacagcgcat gctggtgcag cgtaaggacg aactcctcca
721 gcaagctcgc aaacgtttct tgaacaaaag ttctgaagat gatgcggcct cagagagctt
781 cctcccctcg gaaggtgcgt cctctgaccc cgtgaccctg cgtcgaagga tgctggctgc
841 cgccgcggaa cggaggcttc agaagcagca gacctcctag cgctcccttg ccttcctcag
901 ctgcctcctg cgccctgtgc ccgactgact ggaggaggcc tgtcccaatt ctgcccgctc
961 catggaaaag cgggcttgac tgcattgccg ctgtataaag catgtggtct tatagtgttt
1021 ggacagctga taaatttaat ccttctttgt aatactttct atgtgacatt tctcttcccc
1081 ttagaaacac tgcaaatttt aactgtaggt atgatctctt ctggtgttga ctggactgct
1141 tggggtgggg gacgatcagg aggaagtgag cagtcgcctg cctgcagcag gcagcttcta
1201 ctcctgcctc atgcatacgt cccacaaatg caggtgtcct gagcaccaca cccagtggga
1261 agagtgtggg ggaggcgcac agtgtgagcc cgcccccacg tcgtggggta acatctgtta
1321 tcaaactgct gtcgttgttg tggaagcatg tagactgtgc cagaggccag acccacgggc
1381 tcatgcaccc ctgagccagc agggcatctt ggaaaaggaa ctcttggttc gatacctgga
1441 gcagaggagg ggaaagtcca gggctatagg gtgtgatgaa gtcacccctt tctgtcccac
1501 tacatctggg actgactttc cgagcctcca gtccaaagcc ggcttgattt ccgtgaactc
1561 tggtgctcct gcatctcatg agtgtgcccc atgggtcccc tcccctctca gcatttcctt
1621 gtcccgtctg gacctgggga gtggttaggc agcaagcttt ggtttatggt tttcattcat
1681 tggtgaagta aattaggcag tgctaaagcc tgtgggtttg gtccttgaac aagatgtggg
1741 ccttgcaaga tgggagagta aaccttgaag ggctttatta aagaaataaa aaagaacttt
1801 tgtatcttta aaaaaaaaaa aaaaaa
//