LOCUS BC017028 1730 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens hippocalcin-like 1, mRNA (cDNA clone MGC:9046 IMAGE:3902811), complete cds. ACCESSION BC017028 VERSION BC017028.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1730) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1730) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 22 Row: g Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19913440. FEATURES Location/Qualifiers source 1..1730 /db_xref="H-InvDB:HIT000037796" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9046 IMAGE:3902811" /tissue_type="Pancreas, epithelioid carcinoma" /clone_lib="NIH_MGC_70" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1730 /gene="HPCAL1" /gene_synonym="BDR1" /gene_synonym="HLP2" /gene_synonym="VILIP-3" /db_xref="GeneID:3241" /db_xref="HGNC:HGNC:5145" /db_xref="MIM:600207" CDS 352..933 /gene="HPCAL1" /gene_synonym="BDR1" /gene_synonym="HLP2" /gene_synonym="VILIP-3" /codon_start=1 /product="hippocalcin-like 1" /protein_id="AAH17028.1" /db_xref="GeneID:3241" /db_xref="HGNC:HGNC:5145" /db_xref="MIM:600207" /translation="MGKQNSKLRPEVLQDLRENTEFTDHELQEWYKGFLKDCPTGHLT VDEFKKIYANFFPYGDASKFAEHVFRTFDTNGDGTIDFREFIIALSVTSRGKLEQKLK WAFSMYDLDGNGYISRSEMLEIVQAIYKMVSSVMKMPEDESTPEKRTDKIFRQMDTNN DGKLSLEEFIRGAKSDPSIVRLLQCDPSSASQF" BASE COUNT 320 a 547 c 512 g 351 t ORIGIN 1 gcggactgac gggcgcctcc accttgctcc ctccctggct gccggcttcc ttttgtcttt 61 ctgggcggcg atgagcgcag ggccggcgca gcagctgcgg gcgcacggag gcccgcgctg 121 ctagtcactc ctcccggcct cggcgcgctt gtcccgggca gcggcccggg cccgctgcag 181 ccgccgccgg cgccgaactt gggctcggga agccggcgga ccgcgtcctg cgccggagca 241 ggggcatggt ctagtggccc agtcaggacg cggaaacact ccctggaggt tctgacccac 301 tccctctcag cctccgcctg gtctctggtg tagtcgccgc cgccagccgc catgggcaaa 361 cagaacagca agctgcggcc cgaggtgctg caggacctgc gggagaacac ggagttcacc 421 gaccacgagc tgcaggagtg gtacaagggc ttcctcaagg actgccccac cggccacctg 481 accgtggacg agttcaagaa gatctacgcc aacttcttcc cctacggcga cgcttccaag 541 ttcgccgagc acgtcttccg caccttcgac accaacggcg acggcaccat cgacttccgg 601 gagttcatca ttgcgctgag cgtgacctcg cggggcaagc tggagcagaa gctcaagtgg 661 gccttcagca tgtacgacct ggacggcaac ggctacatca gccgcagcga gatgctggag 721 atcgtgcagg ccatctacaa gatggtgtcg tctgtgatga agatgccgga ggatgagtcc 781 accccggaga agcgcacaga caagatcttc aggcagatgg acaccaacaa tgacggcaaa 841 ctgtccttgg aagaattcat cagaggtgcc aagagcgacc cctccatcgt ccgcctgctg 901 cagtgcgacc ccagcagtgc cagtcagttc tgagcgagcg gcccctggac agttgcagag 961 aaacacaggc ttgtcgtgcc gtttaagctt tgcttgcaag agtggatgcc ccgcaatcgt 1021 tcctgctctc ccgggccccg ggcctggggc atgcgttgca cctgcccggc ccggtggctg 1081 cgcctccctc ctccacctga ccaacgcgac attcctcccc tcacgcctgg cccggtccct 1141 tccagggcaa ctcccaggga tgtggtgaca tgcagggttc aagtgttctt ggttccaggc 1201 acctcccggc tcacggggag ctcagaggtc catgccgagg agaccaggca ggacctcccg 1261 aggctgcgcc ccggccggcc catgcgtttt gtgatcccaa gtgactctgt gggaagggtg 1321 gggacgaggc gtcgggaggg tatacaggga gcccctcccg tgcatggctg cccccccgtt 1381 cattttctcc accacagccg cttgcacgta tagatactgt ggtccccttt cttttaatat 1441 ataaattatg tatggtgaag tggagtgtat tgtgtaggtc ccgtatttaa tgcctctgac 1501 tgcctttgaa gcgcagccct ctgtggcccg cagccccctg agcctggctg ttgtgtggta 1561 tttatgctct ctttgtctgc ctgtttctaa ggaaatgcat gtgtgccctg agccgtgatg 1621 atcctcccat ccgtgttgtg agcacaggca tttgtgtctg gtctgtcctc cctgttgatt 1681 ggtctggcat ttccggtatt aaaatgataa aataaaaaaa aaaaaaaaaa //