LOCUS BC017020 1729 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens single-stranded DNA binding protein 2, mRNA (cDNA
clone MGC:8958 IMAGE:3913337), complete cds.
ACCESSION BC017020
VERSION BC017020.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1729)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1729)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: k Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40787998.
FEATURES Location/Qualifiers
source 1..1729
/db_xref="H-InvDB:HIT000037790"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8958 IMAGE:3913337"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1729
/gene="SSBP2"
/gene_synonym="HSPC116"
/db_xref="GeneID:23635"
/db_xref="HGNC:HGNC:15831"
/db_xref="MIM:607389"
CDS 60..1145
/gene="SSBP2"
/gene_synonym="HSPC116"
/codon_start=1
/product="single-stranded DNA binding protein 2"
/protein_id="AAH17020.1"
/db_xref="GeneID:23635"
/db_xref="HGNC:HGNC:15831"
/db_xref="MIM:607389"
/translation="MYGKGKSNSSAVPSDSQAREKLALYVYEYLLHVGAQKSAQTFLS
EIRWEKNITLGEPPGFLHSWWCVFWDLYCAAPERRETCEHSSEAKAFHDYSAAAAPSP
VLGNIPPGDGMPVGPVPPGFFQPFMSPRYPGGPRPPLRIPNQALGGVPGSQPLLPSGM
DPTRQQGHPNMGGPMQRMTPPRGMVPLGPQNYGGAMRPPLNALGGPGMPGMNMGPGGG
RPWPNPTNANSIPYSSASPGNYVGPPGGGGPPGTPIMPSPADSTNSGDNMYTLMNAVP
PGPNRPNFPMGPGSDGPMGGLGGMESHHMNGSLGSGDMDSISKNSPNNMSLSNQPGTP
RDDGEMGGNFLNPFQSESYSPSMTMSV"
BASE COUNT 514 a 382 c 390 g 443 t
ORIGIN
1 cggggaggct gtgatgggtt gacaggtgcg tgacagtggg agctgctctc ggcacaagca
61 tgtacggcaa aggcaagagt aacagcagcg ccgtcccgtc cgacagccag gcccgggaga
121 agttagcact ctacgtatat gaatatctgc tccatgtagg agctcagaaa tcagctcaaa
181 catttttatc agagataaga tgggaaaaaa acatcacatt gggggaacca ccaggattct
241 tacattcttg gtggtgtgta ttttgggatc tctactgtgc agctccagag agacgtgaaa
301 catgtgaaca ctcaagtgaa gcaaaagcct tccatgatta cagtgctgca gcagctccca
361 gtccagtgct aggaaacatt cccccaggag atggcatgcc agtaggtcct gtaccaccag
421 ggttctttca gccttttatg tcacctcggt accctggagg tccaaggccc ccattgagga
481 tacctaatca ggcacttgga ggtgtcccag gaagtcagcc attactcccc agtggaatgg
541 atccaactcg acaacaagga catccaaata tgggtgggcc aatgcagaga atgactcctc
601 caagaggaat ggtgccctta ggaccacaga actatggagg tgcaatgaga cccccactga
661 atgctttagg tggccctgga atgcctggaa tgaacatggg tccaggtggt ggtagacctt
721 ggccaaaccc aacaaatgcc aattcaatac catactcctc agcatctcct gggaattatg
781 taggtcctcc aggaggtgga gggccaccag gaacacccat catgcctagt ccagcagatt
841 caaccaactc tggtgataac atgtatactt taatgaatgc agtacctcct ggacctaaca
901 gacctaattt tccaatgggt cctgggtcag atggtcccat gggtggatta ggaggaatgg
961 agtcacatca catgaatggc tctttaggct caggagatat ggacagtatt tccaagaatt
1021 ctcccaataa tatgagcctg agtaatcaac cgggcactcc aagggatgat ggcgaaatgg
1081 ggggaaattt cttaaatcct tttcagagtg agagttactc ccctagcatg acaatgagcg
1141 tgtgatccat taccaagtct cctcatgaaa accacagtga gtcagccctt cacagaacta
1201 ctacggaaga aaattattca tcacagtgta cagttaaaca aaggaatctc agtcacacca
1261 aaccaacctt tttatttcct gctctctccc ctcttttgtg aagaaagcgg gtccaaatgt
1321 gattcaaaca actgtacgga gtggcatatt agaattgccc taaactgaac tgcaaataat
1381 tatgtgtgta tgtatatgtg tgggaaagag aatgtactgt atatgtgtat gttatacaga
1441 catatacaca tacatacatt gacccacagg acattgtaaa atattatcac atgacatctt
1501 aagtagaaat aagtagggac ttttattcca tccttttttt cacgtttaca ttttaattat
1561 tacaagttgc tcctgccccc tccctgaact attttgtgct gtgtatatca ctgctttata
1621 taagttattt tttaaggtga actcagatgt tatggttttg taaatgtctg caatcatgga
1681 taggaataaa atcgcttatt tgagagcttt aaaaaaaaaa aaaaaaaaa
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