LOCUS BC016974 1887 bp mRNA linear HUM 18-AUG-2006 DEFINITION Homo sapiens beta-1,3-N-acetylgalactosaminyltransferase 2, mRNA (cDNA clone IMAGE:4393885), partial cds. ACCESSION BC016974 VERSION BC016974.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1887) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1887) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 27 Row: b Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22749020. FEATURES Location/Qualifiers source 1..1887 /db_xref="H-InvDB:HIT000089133" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4393885" /tissue_type="Breast, mammary adenocarcinoma." /clone_lib="NIH_MGC_87" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..1887 /gene="B3GALNT2" /gene_synonym="B3GalNAc-T2" /gene_synonym="MGC39558" /db_xref="GeneID:148789" /db_xref="HGNC:HGNC:28596" /db_xref="MIM:610194" CDS <1..1151 /gene="B3GALNT2" /gene_synonym="B3GalNAc-T2" /gene_synonym="MGC39558" /codon_start=3 /product="B3GALNT2 protein" /protein_id="AAH16974.1" /db_xref="GeneID:148789" /db_xref="HGNC:HGNC:28596" /db_xref="MIM:610194" /translation="RSGAGSCEEPSRRRRARGRACSEWSLVSRRPSVSALAGPLPLRR DAGEPGSRRGRPMRNWLVLLCPCVLGAALHLWLRLRSPPPACASGAGPAGGVSLLLPR LECNGAVSAHPNLHLPGSRDSPASASQVAGITDQLALFPQWKSTHYDVVVGVLSARNN HELRNVIRSTWMRHLLQHPTLSQRVLVKFIIGAHGCEVPVEDREDPYSCKLLNITNPV LNQEIEAFSLSEDTSSGLPEDRVVSVSFRVLYPIVITSLGVFYDANDVGFQRNITVKL YQAEQEEALFIARFSPPSCGVQVNKLWYKPVEQFILPESFEGTIVWESQDLHGLVSRN LHKVTVNDGGGVLRVITAGEGALPHEFLEGVEGVAGGFIYTIQGKFAS" BASE COUNT 449 a 448 c 445 g 545 t ORIGIN 1 ggaggagcgg ggccgggagc tgcgaggagc cctccagacg tcgccgagcg cgagggcggg 61 cgtgctcgga gtggtcgctc gtcagccgcc gcccctcagt ctccgcactt gcaggtcccc 121 tccctctccg ccgggacgcg ggagagcccg gctcgcggcg ggggcggcca atgcgaaact 181 ggctggtgct gctgtgcccg tgtgtgctcg gggccgcgct gcacctctgg ctgcggctgc 241 gctccccgcc gcccgcctgc gcctccgggg ccggccctgc aggtggagtc tcactcttgt 301 tgcccaggct ggagtgcaat ggcgcggtct cggctcaccc caacctccac ctcccgggtt 361 caagagattc tcctgcctca gcctcccaag tagctgggat aacagatcag ttggccttat 421 ttcctcagtg gaaatctact cactatgatg tggtagttgg cgtgttgtca gctcgcaata 481 accatgaact tcgaaacgtg ataagaagca cctggatgag acatttgcta cagcatccca 541 cattaagtca acgtgtgctt gtgaagttca taataggtgc tcatggctgt gaagtgcctg 601 tggaagacag ggaagatcct tattcctgta aactactcaa catcacaaat ccagttttga 661 atcaggaaat tgaagcgttc agtctgtccg aagacacttc atcggggctg cctgaggatc 721 gagttgtcag cgtgagtttc cgagttctct accccatcgt tattaccagt cttggagtgt 781 tctacgatgc caatgatgtg ggtttccaga ggaacatcac tgtcaaactt tatcaggcag 841 aacaagagga ggccctcttc attgctcgct tcagtcctcc aagctgtggt gtgcaggtga 901 acaagctgtg gtacaagccc gtggaacaat tcatcttacc agagagcttt gaaggtacaa 961 tcgtgtggga gagccaagac ctccacggcc ttgtgtcaag aaatctccac aaagtgacag 1021 tgaatgatgg agggggagtt ctcagagtca ttacagctgg ggagggtgca ttgcctcatg 1081 aattcttgga aggtgtggag ggagttgcag gtggttttat atatactatt cagggtaagt 1141 ttgctagttg aaacttgaaa agtacactga atgtcttaca cttaatcttt atacttgaga 1201 gaaaaggatt ttttcttttt tgtcttttaa aaaactttat tcagataaaa ttcacccttt 1261 taaagtggtt cagtggtttt agtgtattct tagagttcta caaccggctc cacctcccaa 1321 aaggaaaccc cacacccatt agcagttact cctcattctt acctccccaa ccccccaccc 1381 cctaacaact actgatgcac tttctttctc tatggatttg cctgttttga acatttcaca 1441 taaatggaaa tgcacagtac gtactctgtg tgtcagtttc tttgctgtaa catgtgttcc 1501 aggtctgtcc attttgtatg tatcagtact tcttttttat gatcatataa tattctattg 1561 catcgatatg ccctatttta ttcattcatt aatggatgga catttagatt gcttctactt 1621 tttgaatatg aataattctg tagtaaacat gtaggtacaa gtttttgtgt ggtcatatat 1681 ttccatttct cttaaatgtc taggagtaga agacctgggt catataattg tgtgtttaat 1741 cacttgaggc actgccaggt tgttttctaa agcagcagcc cactttacat ttccatagtc 1801 agtatatgag gattctagtt tctccatatt cttgtcaaca cttaataaat tgtctgtctt 1861 ttaaaatata ccaaaaaaaa aaaaaaa //