LOCUS BC016937 1929 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens ankyrin repeat domain 13C, mRNA (cDNA clone
IMAGE:3845875), complete cds.
ACCESSION BC016937
VERSION BC016937.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1929)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1929)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC016937.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: f Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13540609
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1929
/db_xref="H-InvDB:HIT000050662"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3845875"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1929
/gene="ANKRD13C"
/gene_synonym="dJ677H15.3"
/gene_synonym="DKFZP566D1346"
/db_xref="GeneID:81573"
CDS 309..752
/gene="ANKRD13C"
/gene_synonym="dJ677H15.3"
/gene_synonym="DKFZP566D1346"
/codon_start=1
/product="ANKRD13C protein"
/protein_id="AAH16937.1"
/db_xref="GeneID:81573"
/translation="MTGEKIRSLRRDHKPSKEEGDLLEPGDEEAAAALGGTFTRSRIG
KGGKACHKIFSNHHHRLQLKAAPASSNPPGAPALPLHNSSVTANSQSPALLAGTNPVA
VVADGGSCPAHYPVHECVFKGDVRRLSSLIRTHNIGQKDNHGEEC"
BASE COUNT 460 a 478 c 437 g 554 t
ORIGIN
1 gaggaagatg gccgtgccct gtttttcggt gtaaggcagc gacggcggct gcgacggcga
61 gactgagatc ctggtgtcgt gggcacctga gttctagctt cccccagcga gcgcgcgtcc
121 cttcgtgcct aggcgagagc cggctcttcc ccgggagatg cgtttgtccc aggctcgggg
181 gctcagtggg agttcatgct gcgctggagg ctcttggcca ccgctctaat cgccttgtgc
241 cgccgcagcg ccagctccgt cgccagcggt gagcctcccg attccccccc ttgcccctgg
301 cggcggcgat gaccggggag aagatccgct cactgcggag ggaccacaag cccagcaaag
361 aagaagggga cctgctggag cccggggatg aggaagcggc ggctgccctc ggcggtacct
421 ttaccagaag caggattggc aagggcggca aagcttgtca taagatcttc agtaaccatc
481 accaccggct acagctgaag gcagctccgg cctcctccaa tccccccggc gccccggctc
541 tgccgctgca caattcctcc gtgactgcca actcccagtc cccggccctt ctggccggca
601 ccaaccccgt tgctgtcgtc gcggatggag gcagttgccc cgcacactac ccggtgcacg
661 agtgcgtctt caagggggat gtgaggagac tctcctctct catccgcacg cacaatatcg
721 ggcagaaaga taatcacggt gaggagtgct agcccctctc cacctctctc cttccccgag
781 cctagggtgt gcctccccag gcttctggaa tcctaggccc cctccagcag actcttcttt
841 ttgcccatca tccgggccgt tcggtaaatc atgatcgact cagtaatagc gtgccagtgg
901 tcaaggggtt ggttcttgtg ggtgcaaagg aatgtatcct ccttgcccac ttcaaagttt
961 gtcgtgagaa gctgttttgt ttgagacagg ccttcgattt gctgattctg gactgtcaga
1021 aattttaggt tgcctcccac ccaacatggt tttctccctt tgtttatgga gctatatatc
1081 tttatttctc tctcttcccc ctaccttggc attttaaatt ttgaacgcat aaattgccct
1141 cctcccttca ttgctcacat acagatccca tcttgactgc aactggttgt gattttgcct
1201 gccaccaggt tgtttctttt ttgtctgctt tcagtaaact tagaatgtta gatttctgaa
1261 agccacacag tagaaatttg ttggtatttg atacgtagaa cagttaaagt gacttctcaa
1321 cagccgattt ttgtttgagt agagatttga ttttttgctt gttttaagta gataattgct
1381 aatagtaatg tctcatcttg atgactgtga ctaaaaatag tattatgatt tttatggtaa
1441 ttttatctta gtcaatattg accatttctt tttgccttgt cagctgaatt ttttgtttaa
1501 ttctaaaaaa taatgtgact gagttgactt ttaagcaaca gtaaatttat tattgaagac
1561 taatgtgaac actgacattt taacatttaa tagccgtttt aaactgggta gttggcaaat
1621 attgttgatc gctctgctat taatatgaaa attgtataca ttcagttaga acacactgaa
1681 ccaactttgt gctcaaaatg atatacgtat caatgaaata tttgcctgtg aaataagctc
1741 acttaattcc attggatcgt aggcttttta ggacaaaaat tcagataaaa aaaacgagta
1801 agatttctct tggctgtata attatctaac aactgcattt gttttcagaa tttacaatgt
1861 tgtaattgta ataaaatcac cacctatcat ttatcataaa tccccaaaaa agtaaaaaaa
1921 aaaaaaaaa
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