LOCUS BC016879 2194 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens zinc finger with UFM1-specific peptidase domain, mRNA
(cDNA clone MGC:17908 IMAGE:3912507), complete cds.
ACCESSION BC016879
VERSION BC016879.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2194)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2194)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: j Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21450835.
FEATURES Location/Qualifiers
source 1..2194
/db_xref="H-InvDB:HIT000037735"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17908 IMAGE:3912507"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2194
/gene="ZUFSP"
/gene_synonym="dJ412I7.3"
/gene_synonym="RP3-412I7.3"
/db_xref="GeneID:221302"
/db_xref="HGNC:HGNC:21224"
CDS 229..1965
/gene="ZUFSP"
/gene_synonym="dJ412I7.3"
/gene_synonym="RP3-412I7.3"
/codon_start=1
/product="zinc finger with UFM1-specific peptidase domain"
/protein_id="AAH16879.1"
/db_xref="GeneID:221302"
/db_xref="HGNC:HGNC:21224"
/translation="MLSCNICGETVTSEPDMKAHLIVHMESEIICPFCKLSGVNYDEM
CFHIETAHFEQNTLERNFERINTVQYGTSDNKKDNTLQCGMEVNSSILSGCASNHPKN
SAQNLTKDSTLKHEGFYSENLTESRKFLKSREKQSSLTEIKGSVYETTYSPPECPFCG
KIEEHSEDMETHVKTKHANLLDIPLEDCDQPLYDCPMCGLICTNYHILQEHVDLHLEE
NSFQQGMDRVQCSGDLQLAHQLQQEEDRKRRSEESRQEIEEFQKLQRQYGLDNSGGYK
QQQLRNMEIEVNRGRMPPSEFHRRKADMMESLALGFDDGKTKTSGIIEALHRYYQNAA
TDVRRVWLSSVVDHFHSSLGDKGWGCGYRNFQMLLSSLLQNDAYNDCLKGMLIPCIPK
IQSMIEDAWKEGFDPQGASQLNNRLQGTKAWIGACEVYILLTSLRVKCHIVDFHKSTG
PLGTHPRLFEWILNYYSSEGEGSPKVVCTSKPPIYLQHQGHSRTVIGIEEKKNRTLCL
LILDPGCPSREMQKLLKQDIEASSLKQLRKSMGNLKHKQYQILAVEGALSLEEKLARR
QASQVFTAEKIP"
BASE COUNT 732 a 384 c 462 g 616 t
ORIGIN
1 ggaagtgctt ttgaatgagg tactgagggc caaggtgttg gaagttccta attctttcct
61 cggttaactg tgaaactctg cgtattggga aggcctggcc tcagtcatca ggccaggaga
121 ggtactggac gccgcgcacg cactcgtctg ccagcgaggc ccaaagggga agcctagcgg
181 agctcagtgt ggcagctgct ggcctctggg ccgctacttg tcaataccat gctttcctgt
241 aatatttgtg gtgaaacagt aacctcagaa ccagacatga aagctcacct aattgttcac
301 atggaaagtg aaattatatg tccattttgc aagttgtcag gtgtgaatta tgatgaaatg
361 tgttttcata tcgaaacagc tcattttgag cagaatacac ttgaaagaaa ctttgagagg
421 ataaatacag tacaatatgg aacttcagat aacaagaaag acaacaccct acagtgtgga
481 atggaagtta attcaagtat tctttcaggt tgtgcatcta atcatccaaa aaattcagct
541 caaaacctga ctaaagatag tactttaaaa catgaaggct tctattcaga gaacttaact
601 gaatctagaa aattcctgaa aagtagggaa aaacagtcca gcctgaccga aataaaagga
661 tctgtttatg aaacaacata cagtcctcct gaatgtccat tctgtggaaa aatagaggag
721 cacagtgaag atatggaaac tcatgtgaaa acaaagcatg ccaatctttt agacattcca
781 ttggaagact gtgatcaacc actctatgat tgtcctatgt gtgggctcat atgtacaaat
841 taccatattc ttcaggaaca tgttgacttg catttggaag aaaacagctt tcagcaaggc
901 atggatagag tccagtgttc tggtgatcta caattggctc accagcttca gcaagaagaa
961 gacagaaaga ggagatctga agaatcaaga caagaaatag aagaatttca gaagctgcag
1021 agacaatatg gtttagataa ttctggagga tacaaacaac aacaactacg aaatatggag
1081 atagaagtaa ataggggaag aatgcctcca tctgaatttc ataggagaaa agctgatatg
1141 atggaatcat tagctcttgg ttttgacgat ggaaaaacaa aaacttccgg aattattgaa
1201 gcacttcata ggtattatca gaatgctgcc acagatgtga gacgggtgtg gctttcttca
1261 gtggtggatc actttcattc atctttaggc gacaaaggtt ggggttgtgg ttacagaaat
1321 ttccaaatgc tactttcatc attattacaa aatgatgctt acaacgattg cttaaaaggt
1381 atgttgattc cttgcattcc aaaaattcaa tctatgattg aagatgcatg gaaggaaggt
1441 tttgatcctc agggggcctc tcaacttaat aacaggttac agggaacaaa ggcctggatt
1501 ggagcatgtg aagtatatat actcctgacc tccctaaggg taaagtgtca tattgttgat
1561 tttcacaaat caactggtcc tttgggtaca caccctcgct tatttgaatg gatattgaac
1621 tattattctt cagagggaga agggagtcca aaggtagtgt gtacatctaa acctcctatc
1681 tatcttcagc atcaaggtca cagtcgaact gttattggaa ttgaagagaa aaaaaaccga
1741 acattatgct tactaatact tgatcctgga tgtccttctc gagaaatgca gaaattatta
1801 aagcaagaca tagaggctag cagtctcaag caacttcgga aatctatggg aaatttaaaa
1861 cataagcaat accagatatt ggcagtagag ggtgctcttt ctctagagga gaaacttgcc
1921 aggagacaag cttctcaagt ctttacagcc gagaagattc cttgaagaat caagcattta
1981 agcatttcag tgattgagaa caatactttg ttttctaaat gtagatattg aactccttaa
2041 tacaattatg aatctgtgaa ttctcttaag tcttaacata taatttaatt tctaaaatgc
2101 ctgtgttaat tgaattatac ctatcatact tcattgtttg gtaaattatt tcaataaaat
2161 gtcttgtttt tgcattgtga aaaaaaaaaa aaaa
//