LOCUS BC016863 1558 bp mRNA linear HUM 10-JUL-2017 DEFINITION Homo sapiens sorting nexin 3, mRNA (cDNA clone MGC:17570 IMAGE:3846511), complete cds. ACCESSION BC016863 VERSION BC016863.3 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1558) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1558) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov REFERENCE 3 (bases 1 to 1558) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-JUL-2017) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK Sequence update by database staff to remove vector contamination COMMENT On Jul 10, 2017 this sequence version replaced BC016863.2. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 20 Row: g Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23111040. FEATURES Location/Qualifiers source 1..1558 /db_xref="H-InvDB:HIT000037730" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17570 IMAGE:3846511" /tissue_type="Colon, adenocarcinoma" /clone_lib="NIH_MGC_65" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1558 /gene="SNX3" /gene_synonym="MGC17570" /gene_synonym="SDP3" /gene_synonym="SNX3A" /db_xref="GeneID:8724" /db_xref="HGNC:HGNC:11174" /db_xref="MIM:605930" CDS 325..666 /gene="SNX3" /gene_synonym="MGC17570" /gene_synonym="SDP3" /gene_synonym="SNX3A" /codon_start=1 /product="SNX3 protein" /protein_id="AAH16863.1" /db_xref="GeneID:8724" /db_xref="HGNC:HGNC:11174" /db_xref="MIM:605930" /translation="MAETVADTRRLITKPQNLNDAYGPPSNFLEIDVSNPQTVGVGRG RFTTYEIRVKTNLPIFKLKESTVRRRYSDFEWLRSELERESKPCLRMTSEARSHGRTW CAQNDEKLFCD" BASE COUNT 428 a 356 c 371 g 403 t ORIGIN 1 tgtttgcgac cccgagtccc atgacaccgc ttctcctcac accccagtcc gcagtgcccc 61 tccccagcct cggccgggcc tcccgggagc cgggcgtggc gttccagcta gtgagccgtt 121 tctcccctgg gctcggaggc ggaagcttga ggggcgcggg gaggagcttc gcgtgcgggg 181 tgaacgcccg ctctacgtgc tcgttctctt cgcgaccgct gcgcgcgagc cccgtgtccc 241 cacggcgggc agcagcggcg gcggcggcgg ctgaacgcgg agggggcgga gggagcccgc 301 ggcggcggca gcagctacag cgaaatggcg gagaccgtgg ctgacacccg gcggctgatc 361 accaagccgc agaacctgaa tgacgcctac ggacccccca gcaacttcct cgagatcgat 421 gtgagcaacc cgcaaacggt gggggtcggc cggggccgct tcaccactta cgaaatcagg 481 gtcaagacaa atcttcctat tttcaagctg aaagaatcta ctgttagaag aagatacagt 541 gactttgaat ggctgcgaag tgaattagaa agagagagca agccctgcct cagaatgaca 601 tcagaggcaa ggagtcatgg aaggacgtgg tgtgctcaga atgatgaaaa gttattttgt 661 gactagaaag tcgtagttcc cccgctccct gggaaagcgt ttttgcgtca gcttcctttt 721 agaggagatg atggaatatt tgatgacaat tttattgagg aaagaaaaca agggctggag 781 cagtttataa acaaggtcgc tggtcatcct ctggcacaga acgaacgttg tcttcacatg 841 tttttacaag atgaaataat agataaaagc tatactccat ctaaaataag acatgcctga 901 aatttggcaa gaaggggcaa aaacgtgact attaatgatt gataagcacc agtgaagaag 961 ttctaacttt tagcatgctg cacagaaact ggtataacat gccttcagta tactaacact 1021 catatgctca gttttgtttt gttttggcag ttgacaagaa gttaatttgc tttagtaaaa 1081 atccctcatt ccagcctttc tatataaata gctctttctt gctgttttaa tgtggtgcac 1141 actatagcct cacaaacctg ttattccagt gtaatctgca gtgtcgtaac taaagttact 1201 ggcttggtct tatttgcaca gtttttgcgt cttgtttgct tcttgcatct gattaactag 1261 aatatttctc tttccccctt ttaatttgtg atgtcacttg accccattta tgtgtaggag 1321 cactacacca ttggtttcca atactgcaca cataagatac atacttgtgt gcagaaagta 1381 tcttcctcca ggcttgtaat acccttcaca tggaagatta atgagggaaa tctttatatt 1441 ctgtataaaa acaaaagcaa atttatatac taaaatcatt tgtctaaaaa tttaagttgt 1501 tttcaaataa aaattaaaat gcatttctga tatgcaaaaa aaaaaaaaaa aaaaaaaa //