LOCUS BC016851 1193 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens cell death-inducing DFFA-like effector c, mRNA (cDNA clone MGC:16833 IMAGE:3851667), complete cds. ACCESSION BC016851 VERSION BC016851.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1193) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1193) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 20 Row: n Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23943903. FEATURES Location/Qualifiers source 1..1193 /db_xref="H-InvDB:HIT000037718" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:16833 IMAGE:3851667" /tissue_type="Colon, adenocarcinoma" /clone_lib="NIH_MGC_65" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1193 /gene="CIDEC" /gene_synonym="CIDE-3" /gene_synonym="FLJ20871" /gene_synonym="Fsp27" /db_xref="GeneID:63924" /db_xref="HGNC:HGNC:24229" CDS 36..752 /gene="CIDEC" /gene_synonym="CIDE-3" /gene_synonym="FLJ20871" /gene_synonym="Fsp27" /codon_start=1 /product="cell death-inducing DFFA-like effector c" /protein_id="AAH16851.1" /db_xref="GeneID:63924" /db_xref="HGNC:HGNC:24229" /translation="MEYAMKSLSLLYPKSLSRHVSVRTSVVTQQLLSEPSPKAPRARP CRVSTADRSVRKGIMAYSLEDLLLKVRDTLMLADKPFFLVLEEDGTTVETEEYFQALA GDTVFMVLQKGQKWQPPSEQGTRHPLSLSHKPAKKIDVARVTFDLYKLNPQDFIGCLN VKATFYDTYSLSYDLHCCGAKRIMKEAFRWALFSMQATGHVLLGTSCYLQQLLDATEE GQPPKGKASSLIPTCLKILQ" BASE COUNT 279 a 357 c 314 g 243 t ORIGIN 1 gaaacatgga gtccaacgca gtccagctga caaggatgga atacgccatg aagtccctta 61 gccttctgta ccccaagtcc ctctccaggc atgtgtcagt gcgtacctct gtggtgaccc 121 agcagctgct gtcggagccc agccccaagg cccccagggc ccggccctgc cgcgtaagca 181 cggcggatcg aagcgtgagg aagggcatca tggcttacag tcttgaggac ctcctcctca 241 aggtccggga cactctgatg ctggcagaca agcccttctt cctggtgctg gaggaagatg 301 gcacaactgt agagacagaa gagtacttcc aagccctggc aggggataca gtgttcatgg 361 tcctccagaa ggggcagaaa tggcagcccc catcagaaca ggggacaagg cacccactgt 421 ccctctccca taagcctgcc aagaagattg atgtggcccg tgtaacgttt gatctgtaca 481 agctgaaccc acaggacttc attggctgcc tgaacgtgaa ggcgactttt tatgatacat 541 actccctttc ctatgatctg cactgctgtg gggccaagcg catcatgaag gaagctttcc 601 gctgggccct cttcagcatg caggccacag gccacgtact gcttggcacc tcctgttacc 661 tgcagcagct cctcgatgct acggaggaag ggcagccccc caagggcaag gcctcatccc 721 ttatcccgac ctgtctgaag atactgcagt gaaagcccaa gtccttggaa gctttcccca 781 gtgaaggact gactgggggc ctcacgctta actggtagtg cccacaagcc tggcagctgt 841 agagccgcga acctccccac acctccctca ccgcgcagga ccctgagtga ggaggaggag 901 ctggaaacct ggggtgggtt ggccaaagga gaacctcaag ctcctggcct gatccagctc 961 cttcctgccc aaggcagctt agcccatcca gactggtcct gaagtctgtc cctccattgg 1021 catgaagtct gccccttagc aatccggcct cgcaggctgt actttcatgg tgctctctac 1081 cttctggccc ccatcccgga acattcctga gtgaattcgc aagcgcacta gcatgtgata 1141 ttagggagtt tgcaataaat tattgaggct gatgtaaaaa aaaaaaaaaa aaa //