LOCUS BC016834 2013 bp mRNA linear HUM 18-JAN-2005
DEFINITION Homo sapiens procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2,
mRNA (cDNA clone IMAGE:3883264), partial cds.
ACCESSION BC016834
VERSION BC016834.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2013)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2013)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: a Column: 10.
FEATURES Location/Qualifiers
source 1..2013
/db_xref="H-InvDB:HIT000089086"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3883264"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2013
/gene="PLOD2"
/gene_synonym="LH2"
/db_xref="GeneID:5352"
/db_xref="MIM:601865"
CDS <1..633
/gene="PLOD2"
/gene_synonym="LH2"
/codon_start=1
/product="PLOD2 protein"
/protein_id="AAH16834.1"
/db_xref="GeneID:5352"
/db_xref="MIM:601865"
/translation="NDLWQIFENPVDWKEKYINRDYSKIFTENIVEQPCPDVFWFPIF
SEKACDELVEEMEHYGKWSGGKHHDSRISGGYENVPTDDIHMKQVDLENVWLHFIREF
IAPVTLKVFAGYYTKGFALLNFVVKYSPERQRSLRPHHDASTFTINIALNNVGEDFQG
GGCKFLRYNCSIESPRKGWSFMHPGRLTHLHEGLPVKNGTRYIAVSFIDP"
BASE COUNT 736 a 287 c 333 g 657 t
ORIGIN
1 aatgacctct ggcagatttt tgaaaatcct gtggactgga aggaaaagta tataaaccgt
61 gattattcaa agattttcac tgaaaatata gttgaacagc cctgtccaga tgtcttttgg
121 ttccccatat tttctgaaaa agcctgtgat gaattggtag aagaaatgga acattacggc
181 aaatggtctg ggggaaaaca tcatgatagc cgtatatctg gtggttatga aaatgtccca
241 actgatgata tccacatgaa gcaagttgat ctggagaatg tatggcttca ttttatccgg
301 gagttcattg caccagttac actgaaggtc tttgcaggct attatacgaa gggatttgca
361 ctactgaatt ttgtagtaaa atactcccct gaacgacagc gttctcttcg tcctcatcat
421 gatgcttcta catttaccat aaacattgca cttaataacg tgggagaaga ctttcaggga
481 ggtggttgca aatttctaag gtacaattgc tctattgagt caccacgaaa aggctggagc
541 ttcatgcatc ctgggagact cacacatttg catgaaggac ttcctgttaa aaatggaaca
601 agatacattg cagtgtcatt tatagatccc taagttattt acttttcatt gaattgaaat
661 ttattttggg tgaatgactg gcatgaacac gtctttgaag ttgtggctga gaagatgaga
721 ggaatattta aataacatca acagaacaac ttcactttgg gccaaacatt tgaaaaactt
781 tttataaaaa attgtttgat atttcttaat gtctgctctg agccttaaaa cacagattga
841 agaagaaaag aaagaaaaaa cttaaatatt tatttctatg ctttgttgcc tctgagaata
901 atgacaattt atgaatttgt gtttcaaatt gataaaatat ttaggtacaa ataacaagac
961 taataatatt ttcttattta aaaaaagcat gggaagattt ttatttatca aaatatagag
1021 gaaatgtaga caaaatggat ataaatgaaa attaccatgt tgtaaaacct tgaaaatcag
1081 attctaactg gatttgtatg caactaagta tttttctgaa cacctatgca ggtcttattt
1141 acagtagtta ctaagggaac acacaaagaa ttacacaacg ttttcctcaa gaaaatggta
1201 caaaacacaa ccgaggagcg tatacagttg aaaacatttt tgttttgatt ggaaggcaga
1261 ttattttata ttagtattaa aaatcaaacc ctatgtttct ttcagatgaa tcttccaaag
1321 tggattatat taagcaggta ttagatttag gaaaaccttt ccatttctta aagtattatc
1381 aagtgtcaag atcagcaagt gtccttaagt caaacaggtt ttttttgttg ttgtttttgc
1441 tttgtttcct tttttagaaa gttctagaaa ataggaaaac gaaaaatttc attgagatga
1501 gtagtgcatt taattatttt ttaaaaaact ttttaagtac ttgaatttta tatcaggaaa
1561 acaaagttgt tgagccttgc ttcttccgtt ttgccctttg tctcgctcct tattcttttt
1621 ttggggggag ggttatttgc ttttttatct tcctggcata atttccattt tattcttctg
1681 agtgtctatg ttaacttccc tctatcccgc ttataaaaaa attctccaac aaaaatactt
1741 gttgacttga tgttttatca cttctctaag taaggttgaa atatccttat tgtagctact
1801 gtttttaatg taaaggttaa acttgaaaag aaattcttaa tcacggtgcc aaaattcatt
1861 ttctaacacc atgtgttaga aaattataaa aaataaaata attttagaaa aaaaaaaaaa
1921 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1981 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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