LOCUS BC016813 1250 bp mRNA linear HTC 13-APR-2006 DEFINITION Homo sapiens solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 pseudogene, mRNA (cDNA clone IMAGE:4092294), with apparent retained intron. ACCESSION BC016813 VERSION BC016813.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1250) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1250) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 32 Row: i Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..1250 /db_xref="H-InvDB:HIT000089077" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4092294" /tissue_type="Bladder, carcinoma" /clone_lib="NIH_MGC_53" /lab_host="DH10B" /note="Vector: pDNR-LIB" BASE COUNT 302 a 313 c 286 g 349 t ORIGIN 1 ggggagttga gatgaattct gtacccaaag cagaatcccc agcatgtgtt cctgaagcgt 61 ccagcactcc ggcgagtctg tggagccctg tcagcaccat ccccaccccg agatggggcc 121 gcatcgtcta tggatgtgcc tttctgcttg ttgtcctgct gtccatgcta tgcctggtat 181 tggcccattg gcccaaacgc ctgttctctg gagagctgat ctacatcgca gcggctgtgt 241 tgctgctggt gctcattgtg ggattcactt tcaccgtctg gagacagccc cagagcaaca 301 ctcctcttta cttcaaggtc cccctgttgc ctgttctcct ctggtcagca tctctgcaca 361 tgtttacctg atgatgcaga tgaccactga gacctgggcc caatgtggag tctggatgtt 421 gattggattt gctatgtatt ttggatatgg gatcccacac agcttggaga acaatcaaca 481 gccaccagcg tcaagctccc aaactcctca tgaaaacatc cctagtccct tgctgaatta 541 gtttaaccac ggaaaaggga tggtccagtc cactggaggt gtcctctgga tgaagggaaa 601 gtgtgaagct ctgtggagca tgaaggtggg atacacttaa agccccttgt gcattgccag 661 tgagcaaaca ctttttaaaa aactttattt tgttgtttgt ttgtttgttt gtttgttata 721 gaggtgagga cttgctctgt tgcccaggcg gaacttgaac tcctgggctc aagtgatcct 781 cctgcctcag tcttccaagc agctgggact acaggtaccc catcataccc agcttaacaa 841 aatatcttta tttgatttga ttttttttct ttttgagaca gagtctcgct ctattgccca 901 gtctggagtg cagtggcatg atcttggctc actgcaacct ccgcctcccg ggttcaagtg 961 attcccctgc gtgagcctcc agagtagctg gaattacagg cacatgacac tgtgcccagc 1021 taatttttct ttattagtag agaccaggtt tcaccatgtt ggccaggctg gtcttgaact 1081 cctgacctca agtgatccac ctgcctcggc ctcccaaagt gctgagatta caggcctgag 1141 ccaccgtgcc cagccaaaat aactttaaaa acttacattt ttaaaaattg acaaataaaa 1201 gttgtctatg tttatggtgc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //