LOCUS BC016654 1409 bp mRNA linear HUM 03-OCT-2003
DEFINITION Homo sapiens RAN, member RAS oncogene family, mRNA (cDNA clone
MGC:17135 IMAGE:4342591), complete cds.
ACCESSION BC016654
VERSION BC016654.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1409)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1409)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (31-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: k Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6042206.
FEATURES Location/Qualifiers
source 1..1409
/db_xref="H-InvDB:HIT000037616"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17135 IMAGE:4342591"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1409
/gene="RAN"
/gene_synonym="ARA24"
/gene_synonym="TC4"
/db_xref="GeneID:5901"
/db_xref="MIM:601179"
CDS 357..1007
/gene="RAN"
/gene_synonym="ARA24"
/gene_synonym="TC4"
/codon_start=1
/product="RAN protein"
/protein_id="AAH16654.1"
/db_xref="GeneID:5901"
/db_xref="MIM:601179"
/translation="MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLG
VEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVP
NWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKP
FLWLARKLIGDPNLEFVAMPALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL"
misc_feature 402..1001
/gene="RAN"
/gene_synonym="ARA24"
/gene_synonym="TC4"
/note="Region: Ran (Ras-related nuclear proteins) /TC4
subfamily of small GTPases"
/db_xref="CDD:smart00176"
BASE COUNT 345 a 349 c 386 g 329 t
ORIGIN
1 cgggcggctg agtaggtggg tggtgcgggc ccggccgggc cggggcagga gacgggcgtg
61 gggtcggcgc tagcccccga gaacccccgt ttcatcctcc gctctcatcc ccgtcccggt
121 cccagtcccg ttcccatccc tacacctccg tccgccgttc cccgggcccc gccgccccgg
181 atgccggccc cgcccgccgc cttcccgctc ccaggcctgg ccgccatggc gccgcgggcg
241 ggaggccttt gtggggcggg cacgtggggc gctgggggcg cgggagcggg gccgccatgg
301 gctgcggggc cgcgcgagcg ctcgcctccg tcctctgcct ccgcaggaac gccgcgatgg
361 ctgcgcaggg agagccccag gtccagttca aacttgtatt ggttggtgat ggtggtactg
421 gaaaaacgac cttcgtgaaa cgtcatttga ctggtgaatt tgagaagaag tatgtagcca
481 ccttgggtgt tgaggttcat cccctagtgt tccacaccaa cagaggacct attaagttca
541 atgtatggga cacagccggc caggagaaat tcggtggact gagagatggc tattatatcc
601 aagcccagtg tgccatcata atgtttgatg taacatcgag agttacttac aagaatgtgc
661 ctaactggca tagagatctg gtacgagtgt gtgaaaacat ccccattgtg ttgtgtggca
721 acaaagtgga tattaaggac aggaaagtga aggcgaaatc cattgtcttc caccgaaaga
781 agaatcttca gtactacgac atttctgcca aaagtaacta caactttgaa aagcccttcc
841 tctggcttgc taggaagctc attggagacc ctaacttgga atttgttgcc atgcctgctc
901 tcgccccacc agaagttgtc atggacccag ctttggcagc acagtatgag cacgacttag
961 aggttgctca gacaactgct ctcccggatg aggatgatga cctgtgagaa tgaagctgga
1021 gcccagcgtc agaagtctag ttttataggc agctgtcctg tgatgtcagc ggtgcagcgt
1081 gtgtgccacc tcattattat ctagctaagc ggaacatgtg cttcatctgt gggatgctga
1141 aggagatgag tgggcttcgg agtgaatgtg gcagtttaaa aaataacttc attgtttgga
1201 cctgcatatt tagctgtttt ggaacgcagt tgattccttg agtttcatat ataagactgc
1261 tgcagtcaca tcacaatatt cagtggtgaa atcttgtttg ttactgtcat tcccattcct
1321 tttcgtttag aatcagaata aagttgtatt tcaaatatca aaaaaaaaaa aaaaaaaaaa
1381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//