LOCUS BC016487 3191 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens ubiquitin specific peptidase 36, mRNA (cDNA clone IMAGE:3924730), partial cds. ACCESSION BC016487 VERSION BC016487.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3191) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3191) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 26 Row: f Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 35250685. FEATURES Location/Qualifiers source 1..3191 /db_xref="H-InvDB:HIT000089000" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3924730" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..>3191 /gene="USP36" /gene_synonym="DUB1" /db_xref="GeneID:57602" /db_xref="HGNC:HGNC:20062" CDS 303..>3191 /gene="USP36" /gene_synonym="DUB1" /codon_start=1 /product="USP36 protein" /protein_id="AAH16487.1" /db_xref="GeneID:57602" /db_xref="HGNC:HGNC:20062" /translation="MPIVDKLKEALKPGRKDSADDGELGKLLASSAKKVLLQKIEFEP ASKSFSYQLEALKSKYVLLNPKTEGASRHKSGDDPPARRQGSEHTYESCGDGVPAPQK VLFPTERLSLRWERVFRVGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCH QGSFCMLCVMQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTID AMQKACLNGCAKLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIR QAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANF SGGKITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNG QWYQMNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSSLPGRPSVIP DHSKKNIGNGIISSPLTGKRQDSGTMKKPHTTEEIGVPISRNGSTLGLKSQNGCIPPK LPSGSPSPKLSQTPTHMPTILDDPGKKVKKPAPPQHFSPRTAQGLPGTSNSNSSRSGS QRQGSWDSRDVVLSTSPKLLATATANGHGLKGNDESAGLDRRGSSSSSPEHSASSDST KAPQTPRSGAAHLCDSQETNCSTAGHSKTPPSGADSKTVKLKSPVLSNTTTEPASTMS PPPAKKLALSAKKASTLWRATGNDLRPPPPSPSSDLTHPMKTSHPVVASTWPVHRARA VSPAPQSSSRLQPPFSPHPTLLSSTPKPPGTSEPRSCSSISTALPQVNEDLVSLPHQL PEASEPPQSPSEKRKKTFVGEPQRLGSETRLPQHIREATAAPHGKRKRKKKKRPEDTA ASALQEGQTQRQPGSPMYRREGQAQLPAVRRQEDGTQPQVNGQQVGCVTDGHHASSRK RRRKGAEGLGEEGGLHQDPLRHSCSPMGDGDPEAMEESPRKKKKKKKKK" BASE COUNT 768 a 1006 c 867 g 550 t ORIGIN 1 ggcgccttta agcgtcgcgg tgacacgtgt gtgaggcgcc ggaggcccgg atggtgcgcg 61 tgctgggccg cgggccgaag gagtcgccag ggctgcgtag gcttgtggcg cgcccgcgga 121 gaggccgggg ctctgacgcc cgctctgcgg cttcggtgtt tgaacaggcc acagtccagg 181 agcgcttaca ttcaggagct ccgcgtagca cctgcccaac caaactcagc cctccgttaa 241 gatcctggtt ccatgccgca gtaggacagc aggcccaagt ctgcacatcc cagtgatgca 301 ccatgccaat agtggataag ttgaaggagg ccctgaaacc cggccgcaag gactcggctg 361 atgatggaga actggggaag cttcttgcct cctctgccaa gaaggtcctt ttacagaaaa 421 tcgagttcga gccagccagc aagagcttct cctaccagct ggaggcctta aagagcaaat 481 atgtgttgct caaccccaaa acagagggag ctagtcgcca caagagtgga gatgacccac 541 cggccaggag acagggcagt gagcacacgt atgagagctg tggtgacgga gtcccagccc 601 cgcagaaagt gcttttcccc acggagcgac tgtctctgag gtgggagcgg gtcttccgcg 661 tgggcgcagg actccacaac cttggcaaca cctgctttct caatgccacc atccagtgct 721 tgacctacac accacctcta gccaactacc tgctctccaa ggagcatgct cgcagctgcc 781 accagggaag cttctgcatg ctgtgtgtca tgcagaacca cattgtccag gccttcgcca 841 acagcggcaa cgccatcaag cccgtctcct tcatccgaga cctgaaaaag atcgcccgac 901 acttccgctt tgggaaccag gaggacgcgc atgagttcct gcggtacacc atcgacgcca 961 tgcagaaagc ctgcctgaat ggctgtgcca agttggatcg tcaaacgcag gctactacct 1021 tggtccatca aatttttgga gggtatctca gatcacgcgt gaagtgctcc gtgtgcaaga 1081 gcgtctcgga cacctacgac ccctacttgg acatcgcgct ggagatccgg caagctgcga 1141 atattgtgcg tgctctggaa ctttttgtga aagcagatgt cctgagtgga gagaatgcct 1201 acatgtgtgc taaatgcaag aagaaggttc cagccagcaa gcgcttcacc atccacagaa 1261 catccaacgt cttaaccctt tccctcaagc gctttgccaa cttcagcggg gggaagatca 1321 ccaaggatgt aggctatccg gaattcctca acatacgtcc gtatatgtcc cagaataatg 1381 gtgatcctgt catgtatgga ctctatgctg tcctggtgca ctcgggctac agctgccatg 1441 ccgggcacta ttactgctac gtgaaggcaa gcaatggaca gtggtaccag atgaatgatt 1501 ccttggtcca ttccagcaac gtcaaggtgg ttctgaacca gcaggcctac gtgctgttct 1561 atctgcgaat tccaggctct aagaaaagtc ccgagggcct catctccagg acaggctcct 1621 cctcccttcc cggccgcccg agtgtgattc cagatcactc caagaagaac atcggcaatg 1681 ggattatttc ctccccactg actggaaagc gacaagactc tgggacgatg aagaagccgc 1741 acaccactga agagattggt gtgcccatat ccaggaatgg ctccaccctg ggcctgaagt 1801 cccagaacgg ctgcattcct ccaaagctgc cctcggggtc cccttccccc aaactctccc 1861 agacacccac acacatgcca accatcctag acgaccctgg aaagaaggtg aagaagccag 1921 ctcctccaca gcacttttcc cccagaactg ctcaggggct gcctgggacc agcaactcga 1981 atagcagcag atctgggagc caaaggcagg gctcctggga cagcagggat gttgtcctct 2041 ctacctcacc taagctcctg gctacagcca ctgccaacgg gcatgggctg aaggggaacg 2101 acgagagcgc tggcctcgac aggaggggct ccagcagctc cagcccagag cactcggcca 2161 gcagcgactc caccaaggcc ccccagaccc ccaggagtgg agcggcccat ctctgcgatt 2221 ctcaggaaac gaactgttcc accgctggcc actccaaaac gccgccaagt ggagcagatt 2281 ctaagacggt gaagctgaag tcccctgtcc tgagcaacac caccactgag cctgcaagca 2341 ccatgtctcc tccaccagcc aaaaaactgg ccctttctgc caagaaggcc agcaccctgt 2401 ggagggcgac cggcaatgac ctccgtccac ctcccccctc accatcctcc gacctcaccc 2461 accccatgaa aacctctcac cccgtcgttg cctccacttg gcccgtccat agagccaggg 2521 ctgtgtcacc tgctccccaa tcatccagcc gcctgcaacc ccccttcagc ccccacccca 2581 cattgctgtc cagtaccccc aagcccccag ggacgtcaga accacggagc tgctcctcca 2641 tctcgacggc gctgcctcag gtcaacgagg accttgtgtc tcttccacac cagttgccag 2701 aggccagtga gcccccccag agcccctctg agaagaggaa aaagaccttt gtgggagagc 2761 cgcagaggct gggctcagag acgcgcctcc cacagcacat cagggaggcc actgcggctc 2821 cccacgggaa gaggaagagg aagaagaaga agcgcccgga ggacacagct gccagcgccc 2881 tgcaggaggg gcagacacag agacagcctg ggagccccat gtacaggagg gagggccagg 2941 cacagctgcc cgctgtcaga cggcaggaag atggcacaca gccacaggtg aatggccagc 3001 aggtgggatg tgttacggac ggccaccacg cgagcagcag gaagcggagg aggaaaggag 3061 cagaaggtct tggtgaagaa ggcggcctgc accaggaccc acttcggcac agctgctctc 3121 ccatgggtga tggtgatcca gaggccatgg aagagtctcc aaggaaaaag aaaaagaaaa 3181 aaaaaaaaaa a //